Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   EGX64_RS03245 Genome accession   NZ_CP033782
Coordinates   610491..611156 (-) Length   221 a.a.
NCBI ID   WP_002447011.1    Uniprot ID   -
Organism   Staphylococcus epidermidis strain FDAARGOS_529     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 605491..616156
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX64_RS03225 (EGX64_03225) - 606021..606611 (-) 591 WP_002447015.1 DUF4064 domain-containing protein -
  EGX64_RS03230 (EGX64_03230) - 606715..608727 (-) 2013 WP_002495980.1 FtsX-like permease family protein -
  EGX64_RS03235 (EGX64_03235) - 608729..609478 (-) 750 WP_002495981.1 ABC transporter ATP-binding protein -
  EGX64_RS03240 (EGX64_03240) braS 609589..610485 (-) 897 WP_002447012.1 sensor histidine kinase Regulator
  EGX64_RS03245 (EGX64_03245) braR 610491..611156 (-) 666 WP_002447011.1 response regulator transcription factor Regulator
  EGX64_RS03250 (EGX64_03250) - 611187..611366 (-) 180 WP_002447010.1 hypothetical protein -
  EGX64_RS03255 (EGX64_03255) - 611663..613132 (+) 1470 WP_002447009.1 alkaline phosphatase -
  EGX64_RS03260 (EGX64_03260) - 613256..614800 (-) 1545 WP_002447008.1 NAD(P)H-binding protein -

Sequence


Protein


Download         Length: 221 a.a.        Molecular weight: 25643.77 Da        Isoelectric Point: 5.1924

>NTDB_id=325669 EGX64_RS03245 WP_002447011.1 610491..611156(-) (braR) [Staphylococcus epidermidis strain FDAARGOS_529]
MKIFIVEDDLVIAESLANELSKWNYEVHVIDNFEKIMEDFRRVEPQLVLLDINLPTLNGFHWCQEIRKVSRVPIMFISSR
TDNMDQILAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSIARDEIAVKGCKLIVDEAKLSKDNEHVQLSLTELQILK
LLFQNENKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDNLIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=325669 EGX64_RS03245 WP_002447011.1 610491..611156(-) (braR) [Staphylococcus epidermidis strain FDAARGOS_529]
ATGAAGATTTTCATTGTAGAAGACGATTTAGTGATTGCTGAAAGTTTAGCTAATGAGCTATCTAAATGGAATTATGAGGT
TCATGTGATTGATAATTTTGAAAAGATAATGGAAGATTTTCGCAGAGTAGAACCACAACTCGTATTATTAGATATCAATC
TACCAACCCTTAATGGCTTCCATTGGTGCCAAGAAATACGAAAAGTATCTCGTGTGCCTATTATGTTTATTAGTTCAAGA
ACAGATAATATGGATCAAATTCTGGCTATTCAAATGGGTGGCGATGATTTTATCGAGAAACCATTTAACTTGTCTTTAAC
AGTAGCTAAAATTCAGGCACTATTGCGTCGCACTTATGATTTATCAATAGCTCGTGATGAAATAGCTGTTAAAGGTTGTA
AACTAATTGTTGATGAGGCGAAGCTTAGCAAGGATAATGAACATGTTCAACTTTCCTTAACAGAGCTACAGATATTAAAA
TTGTTATTTCAAAATGAAAATAAATATGTAAGTCGTACAGCTTTAATTGAGAAATGTTGGGAGTCTGAGAATTTTATTGA
TGACAATACGCTAGCAGTAAATATGACGCGATTACGAAAAAAATTACTTTCTATCGGTGTCGATAATTTAATTGAGACAA
AGAAAAATGTAGGATACAGGGTTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

78.733

100

0.787


Multiple sequence alignment