Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   EGX64_RS03240 Genome accession   NZ_CP033782
Coordinates   609589..610485 (-) Length   298 a.a.
NCBI ID   WP_002447012.1    Uniprot ID   -
Organism   Staphylococcus epidermidis strain FDAARGOS_529     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 604589..615485
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX64_RS03225 (EGX64_03225) - 606021..606611 (-) 591 WP_002447015.1 DUF4064 domain-containing protein -
  EGX64_RS03230 (EGX64_03230) - 606715..608727 (-) 2013 WP_002495980.1 FtsX-like permease family protein -
  EGX64_RS03235 (EGX64_03235) - 608729..609478 (-) 750 WP_002495981.1 ABC transporter ATP-binding protein -
  EGX64_RS03240 (EGX64_03240) braS 609589..610485 (-) 897 WP_002447012.1 sensor histidine kinase Regulator
  EGX64_RS03245 (EGX64_03245) braR 610491..611156 (-) 666 WP_002447011.1 response regulator transcription factor Regulator
  EGX64_RS03250 (EGX64_03250) - 611187..611366 (-) 180 WP_002447010.1 hypothetical protein -
  EGX64_RS03255 (EGX64_03255) - 611663..613132 (+) 1470 WP_002447009.1 alkaline phosphatase -
  EGX64_RS03260 (EGX64_03260) - 613256..614800 (-) 1545 WP_002447008.1 NAD(P)H-binding protein -

Sequence


Protein


Download         Length: 298 a.a.        Molecular weight: 34940.56 Da        Isoelectric Point: 6.8361

>NTDB_id=325668 EGX64_RS03240 WP_002447012.1 609589..610485(-) (braS) [Staphylococcus epidermidis strain FDAARGOS_529]
MKFAYIQSIRNEISIILIILLFFALIFYVFSLPFDAYVLAISIILLLMCVRWWIKYLNFKKNEHLKDKVAYLEHELAHVK
NQQIEYRNDVESYFLTWVHQIKTPITASQLLLERNEENVVNRVRQEIVHIDNYTSLALSYLKLLNEESDMTITKVTVDDL
IRPLILKYRIQFIEQKTQIHYEKSEDIILTDTQWASIMIEQLLNNALKYAKGKDIWIDFDVANQTLQIKDNGIGISKADI
PKIFDKGYSGFNGRLNEQSTGIGLFIVQHIANHLNIQVTVQSELNHGTVFFIHFTKEK

Nucleotide


Download         Length: 897 bp        

>NTDB_id=325668 EGX64_RS03240 WP_002447012.1 609589..610485(-) (braS) [Staphylococcus epidermidis strain FDAARGOS_529]
ATGAAGTTTGCATATATTCAATCGATTCGTAATGAGATTTCAATTATTTTAATAATTCTATTATTTTTTGCACTTATATT
TTATGTATTTTCTTTACCTTTTGATGCATACGTACTAGCAATCAGTATCATATTACTATTGATGTGTGTACGTTGGTGGA
TAAAGTATTTAAATTTTAAAAAGAACGAACATCTTAAAGATAAAGTGGCATATTTAGAACATGAGTTAGCACATGTTAAG
AATCAGCAAATTGAATATCGTAATGATGTTGAAAGTTATTTTTTAACATGGGTACATCAAATTAAAACACCTATCACTGC
CTCACAATTACTTTTGGAGAGAAACGAGGAGAATGTAGTTAATCGTGTTAGACAAGAAATTGTGCACATTGATAATTATA
CAAGCCTCGCATTAAGTTATTTAAAATTATTAAATGAAGAGTCAGATATGACAATTACCAAAGTGACAGTTGATGATTTG
ATTCGGCCGTTGATTTTAAAATATAGAATTCAGTTTATTGAACAAAAGACGCAAATCCATTATGAAAAAAGTGAGGACAT
CATTTTAACCGATACACAATGGGCTTCTATAATGATAGAGCAACTTTTAAATAATGCTTTAAAATATGCTAAAGGTAAAG
ATATATGGATAGATTTTGATGTTGCCAATCAAACTCTACAGATTAAAGATAATGGTATTGGGATTAGTAAAGCAGATATT
CCTAAAATTTTTGATAAAGGATACTCAGGATTTAACGGTAGATTGAATGAACAATCAACTGGTATAGGTTTATTTATAGT
GCAACACATTGCAAATCATTTAAATATACAAGTAACTGTACAATCAGAGTTGAATCATGGGACAGTATTTTTTATACATT
TTACTAAAGAAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

60

98.993

0.594


Multiple sequence alignment