Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   EGX68_RS08355 Genome accession   NZ_CP033735
Coordinates   1618581..1619624 (-) Length   347 a.a.
NCBI ID   WP_019469615.1    Uniprot ID   A0A6N7XY82
Organism   Staphylococcus cohnii strain FDAARGOS_538     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1613581..1624624
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX68_RS08325 (EGX68_08330) - 1614137..1615375 (-) 1239 WP_019469621.1 aminopeptidase -
  EGX68_RS08330 (EGX68_08335) - 1615390..1615593 (-) 204 WP_019469620.1 DUF1128 family protein -
  EGX68_RS08335 (EGX68_08340) - 1615726..1616190 (+) 465 WP_019469619.1 low molecular weight protein-tyrosine-phosphatase -
  EGX68_RS08340 (EGX68_08345) - 1616198..1616482 (+) 285 WP_103211099.1 hypothetical protein -
  EGX68_RS08345 (EGX68_08350) - 1616795..1617874 (+) 1080 WP_019469617.1 YihY/virulence factor BrkB family protein -
  EGX68_RS08350 (EGX68_08355) vraR 1617962..1618591 (-) 630 WP_019469616.1 response regulator transcription factor Regulator
  EGX68_RS08355 (EGX68_08360) vraS 1618581..1619624 (-) 1044 WP_019469615.1 sensor histidine kinase Regulator
  EGX68_RS08360 (EGX68_08365) liaF 1619621..1620322 (-) 702 WP_019469614.1 cell wall-active antibiotics response protein LiaF -
  EGX68_RS08365 (EGX68_08370) - 1620339..1620725 (-) 387 WP_019469613.1 hypothetical protein -
  EGX68_RS08370 (EGX68_08375) map 1620830..1621582 (-) 753 WP_019469612.1 type I methionyl aminopeptidase -
  EGX68_RS08375 (EGX68_08380) - 1621759..1622745 (+) 987 WP_019469611.1 aromatic acid exporter family protein -
  EGX68_RS08380 (EGX68_08385) - 1622839..1623561 (-) 723 WP_019469610.1 type 1 glutamine amidotransferase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40030.41 Da        Isoelectric Point: 5.8532

>NTDB_id=325196 EGX68_RS08355 WP_019469615.1 1618581..1619624(-) (vraS) [Staphylococcus cohnii strain FDAARGOS_538]
MNHYIRAIGSMLILVYSTFFAMFFIDKVFVNIIYFQGMIYTQIFGIPVLLFINLLVILLCIIVGSVLAYKINQQNHWLQD
QIERSIEGQTVGINDQNIELYNETIELYQTLVPLNQEVHRLRLKTQNLTNESYNMNDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETDLKAPLDQQIPVLEKMIQDSQLEMRALLLHLRPIGLKDKSLGQGIKDLVVDLQKKVPMKVVHDI
EEFDVPKGIEDHLFRITQEAISNTLRHSKGTKVTIELFNREEYLLLRIQDDGKGFNVDDKVEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYAD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=325196 EGX68_RS08355 WP_019469615.1 1618581..1619624(-) (vraS) [Staphylococcus cohnii strain FDAARGOS_538]
ATGAATCACTACATAAGAGCAATAGGATCAATGTTGATATTAGTTTATAGTACATTTTTCGCTATGTTTTTTATAGATAA
AGTTTTTGTGAATATTATATATTTTCAAGGCATGATTTATACGCAAATCTTTGGAATACCAGTTTTACTATTTATCAACT
TATTAGTTATATTACTTTGCATCATTGTTGGCTCAGTATTAGCGTATAAAATCAATCAACAAAATCATTGGTTACAAGAC
CAAATTGAGCGTTCTATAGAAGGACAAACAGTAGGTATCAATGATCAAAATATAGAATTATATAATGAAACAATTGAATT
ATATCAAACGCTTGTACCGCTCAATCAAGAAGTTCATAGATTGCGTTTAAAAACACAAAATTTAACGAATGAATCATATA
ATATGAACGATGTGAAAGTTAAAAAAATAATTGAAGACGAAAGACAAAGACTGGCTCGAGAGTTACATGATTCCGTAAGC
CAGCAATTGTTTGCAGCAAGTATGATGCTCTCTGCTATTAAAGAAACTGATTTGAAAGCACCTTTAGATCAACAAATTCC
AGTATTGGAAAAAATGATCCAAGATTCACAGTTAGAAATGCGTGCCTTGCTATTGCATTTAAGACCAATTGGCTTGAAAG
ATAAATCACTTGGCCAAGGTATCAAAGATTTAGTGGTTGATTTGCAGAAAAAGGTGCCTATGAAAGTTGTACATGATATT
GAAGAATTCGACGTACCCAAAGGTATAGAAGATCATTTATTTAGAATTACACAAGAAGCAATTTCAAATACATTAAGACA
TTCAAAAGGGACAAAAGTTACAATTGAATTGTTTAATAGAGAAGAATATTTATTATTACGTATACAAGATGATGGTAAAG
GCTTTAATGTAGATGATAAGGTAGAACAAAGCTATGGGTTAAAAAATATGCGCGAACGAGCACTTGAAATAGGCGCAACG
TTTCATATAGTATCACTGCCAGATTCAGGAACACGAATTGAAGTCAAAGCCCCATTAAATAAGGAGGATTCATATGCCGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6N7XY82

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

86.455

100

0.865


Multiple sequence alignment