Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | EGX58_RS10270 | Genome accession | NZ_CP033732 |
| Coordinates | 2024902..2025876 (+) | Length | 324 a.a. |
| NCBI ID | WP_002449861.1 | Uniprot ID | - |
| Organism | Staphylococcus hominis strain FDAARGOS_575 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2019902..2030876
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGX58_RS10235 (EGX58_10245) | rpmG | 2020364..2020513 (+) | 150 | WP_002449881.1 | 50S ribosomal protein L33 | - |
| EGX58_RS10240 (EGX58_10250) | - | 2020722..2021273 (+) | 552 | WP_002449726.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| EGX58_RS10245 (EGX58_10255) | - | 2021273..2022730 (+) | 1458 | WP_002449916.1 | rhomboid family protein | - |
| EGX58_RS10250 (EGX58_10260) | - | 2022714..2022917 (+) | 204 | WP_037555982.1 | YqgQ family protein | - |
| EGX58_RS10255 (EGX58_10265) | - | 2022914..2023900 (+) | 987 | WP_002449785.1 | ROK family glucokinase | - |
| EGX58_RS10260 (EGX58_10270) | - | 2023900..2024223 (+) | 324 | WP_103288190.1 | MTH1187 family thiamine-binding protein | - |
| EGX58_RS10265 (EGX58_10275) | - | 2024225..2024851 (+) | 627 | WP_002449717.1 | MBL fold metallo-hydrolase | - |
| EGX58_RS10270 (EGX58_10280) | comGA | 2024902..2025876 (+) | 975 | WP_002449861.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EGX58_RS10275 (EGX58_10285) | comGB | 2025848..2026912 (+) | 1065 | WP_002455292.1 | competence type IV pilus assembly protein ComGB | - |
| EGX58_RS10280 (EGX58_10290) | comGC | 2026931..2027242 (+) | 312 | WP_002449700.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EGX58_RS10285 (EGX58_10295) | comGD | 2027232..2027666 (+) | 435 | WP_002449773.1 | competence type IV pilus minor pilin ComGD | - |
| EGX58_RS10290 (EGX58_10300) | - | 2027858..2028355 (+) | 498 | WP_002449908.1 | competence protein ComG | - |
| EGX58_RS10300 (EGX58_10310) | - | 2028520..2029029 (+) | 510 | WP_002449809.1 | shikimate kinase | - |
| EGX58_RS10305 (EGX58_10315) | gcvT | 2029221..2030312 (+) | 1092 | WP_002455297.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36955.92 Da Isoelectric Point: 8.2269
>NTDB_id=325167 EGX58_RS10270 WP_002449861.1 2024902..2025876(+) (comGA) [Staphylococcus hominis strain FDAARGOS_575]
MKLLFQEIINKAISKNASDVHFIPSEDKVHIKFRVNDRLETYEIFSNDIYEKLLIYMKFKANLDVSTHQVAQSGRYTYHA
KSIFYLRISTLPLSLGIESCVIRLIPQYFTSKREYKDFNDFKPLMNKKQGLILLTGPTGSGKSTLMYQLVLYAFQELNLN
VITIENPVEQLLKGITQVSVNHKAGIDYVNSFKAILRCDPDVILIGEIRDAEVAKCVIQASLSGHLVLTTMHSSNCKGAI
LRLLEMGISVQEISQAINVISNQRLVTTTLNQRKLVCESITNNQIQYFFEHNHTLPETFNNLKEKLLSLSKEGLICEDVV
EKYI
MKLLFQEIINKAISKNASDVHFIPSEDKVHIKFRVNDRLETYEIFSNDIYEKLLIYMKFKANLDVSTHQVAQSGRYTYHA
KSIFYLRISTLPLSLGIESCVIRLIPQYFTSKREYKDFNDFKPLMNKKQGLILLTGPTGSGKSTLMYQLVLYAFQELNLN
VITIENPVEQLLKGITQVSVNHKAGIDYVNSFKAILRCDPDVILIGEIRDAEVAKCVIQASLSGHLVLTTMHSSNCKGAI
LRLLEMGISVQEISQAINVISNQRLVTTTLNQRKLVCESITNNQIQYFFEHNHTLPETFNNLKEKLLSLSKEGLICEDVV
EKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=325167 EGX58_RS10270 WP_002449861.1 2024902..2025876(+) (comGA) [Staphylococcus hominis strain FDAARGOS_575]
TTGAAATTATTATTTCAAGAAATAATTAATAAAGCAATTTCAAAAAATGCAAGTGACGTACACTTTATTCCTTCAGAGGA
TAAAGTACATATTAAATTCAGAGTGAATGATAGGTTAGAGACGTATGAAATATTTAGTAATGACATTTATGAAAAATTAT
TAATTTATATGAAATTTAAAGCAAATTTAGATGTATCAACACATCAAGTAGCTCAAAGTGGTAGATATACTTATCATGCT
AAATCAATATTTTATTTAAGAATTTCTACTTTACCTTTGTCATTAGGAATAGAAAGTTGTGTTATCAGACTTATCCCTCA
ATATTTCACTTCTAAAAGAGAGTATAAAGACTTTAATGACTTTAAACCTCTAATGAATAAAAAGCAAGGTCTCATTTTAC
TTACTGGTCCAACAGGTTCAGGTAAAAGTACTTTGATGTATCAATTAGTACTCTATGCTTTTCAAGAATTAAATTTAAAT
GTTATTACAATAGAAAATCCTGTTGAACAATTATTAAAAGGGATAACACAAGTGTCAGTAAATCATAAAGCTGGTATAGA
TTATGTTAATTCATTTAAAGCAATATTAAGATGTGATCCAGATGTTATTTTAATTGGTGAAATTAGAGATGCTGAAGTGG
CAAAATGTGTTATTCAAGCAAGTTTAAGTGGTCATTTAGTACTAACCACTATGCATTCAAGCAATTGTAAGGGCGCAATA
CTCAGATTGTTAGAGATGGGGATTAGTGTTCAAGAAATTTCACAAGCAATAAATGTCATTTCAAATCAAAGATTAGTTAC
AACTACTTTAAATCAAAGAAAGCTTGTTTGTGAGTCTATTACAAATAATCAAATTCAATATTTTTTTGAACATAACCATA
CGCTTCCTGAGACATTTAATAATTTAAAAGAAAAATTGTTATCGCTATCGAAAGAAGGTCTTATATGTGAAGATGTGGTT
GAAAAATATATTTAA
TTGAAATTATTATTTCAAGAAATAATTAATAAAGCAATTTCAAAAAATGCAAGTGACGTACACTTTATTCCTTCAGAGGA
TAAAGTACATATTAAATTCAGAGTGAATGATAGGTTAGAGACGTATGAAATATTTAGTAATGACATTTATGAAAAATTAT
TAATTTATATGAAATTTAAAGCAAATTTAGATGTATCAACACATCAAGTAGCTCAAAGTGGTAGATATACTTATCATGCT
AAATCAATATTTTATTTAAGAATTTCTACTTTACCTTTGTCATTAGGAATAGAAAGTTGTGTTATCAGACTTATCCCTCA
ATATTTCACTTCTAAAAGAGAGTATAAAGACTTTAATGACTTTAAACCTCTAATGAATAAAAAGCAAGGTCTCATTTTAC
TTACTGGTCCAACAGGTTCAGGTAAAAGTACTTTGATGTATCAATTAGTACTCTATGCTTTTCAAGAATTAAATTTAAAT
GTTATTACAATAGAAAATCCTGTTGAACAATTATTAAAAGGGATAACACAAGTGTCAGTAAATCATAAAGCTGGTATAGA
TTATGTTAATTCATTTAAAGCAATATTAAGATGTGATCCAGATGTTATTTTAATTGGTGAAATTAGAGATGCTGAAGTGG
CAAAATGTGTTATTCAAGCAAGTTTAAGTGGTCATTTAGTACTAACCACTATGCATTCAAGCAATTGTAAGGGCGCAATA
CTCAGATTGTTAGAGATGGGGATTAGTGTTCAAGAAATTTCACAAGCAATAAATGTCATTTCAAATCAAAGATTAGTTAC
AACTACTTTAAATCAAAGAAAGCTTGTTTGTGAGTCTATTACAAATAATCAAATTCAATATTTTTTTGAACATAACCATA
CGCTTCCTGAGACATTTAATAATTTAAAAGAAAAATTGTTATCGCTATCGAAAGAAGGTCTTATATGTGAAGATGTGGTT
GAAAAATATATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
69.753 |
100 |
0.698 |
| comGA | Staphylococcus aureus N315 |
69.753 |
100 |
0.698 |