Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   EGX58_RS08690 Genome accession   NZ_CP033732
Coordinates   1728723..1729757 (+) Length   344 a.a.
NCBI ID   WP_002450020.1    Uniprot ID   -
Organism   Staphylococcus hominis strain FDAARGOS_575     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1723723..1734757
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX58_RS08665 (EGX58_08675) - 1724416..1725405 (-) 990 WP_049438092.1 FUSC family protein -
  EGX58_RS08670 (EGX58_08680) map 1725579..1726331 (+) 753 WP_002455125.1 type I methionyl aminopeptidase -
  EGX58_RS08675 (EGX58_08685) - 1726380..1727390 (-) 1011 WP_002455126.1 HoxN/HupN/NixA family nickel/cobalt transporter -
  EGX58_RS08680 (EGX58_08690) - 1727618..1728004 (+) 387 WP_002455127.1 hypothetical protein -
  EGX58_RS08685 (EGX58_08695) liaF 1728025..1728726 (+) 702 WP_002450089.1 cell wall-active antibiotics response protein LiaF -
  EGX58_RS08690 (EGX58_08700) vraS 1728723..1729757 (+) 1035 WP_002450020.1 sensor histidine kinase Regulator
  EGX58_RS08695 (EGX58_08705) vraR 1729759..1730388 (+) 630 WP_002450048.1 two-component system response regulator VraR Regulator
  EGX58_RS08700 (EGX58_08710) - 1730468..1731676 (-) 1209 WP_002455128.1 YihY/virulence factor BrkB family protein -
  EGX58_RS08705 (EGX58_08715) - 1731768..1732049 (-) 282 WP_002450075.1 hypothetical protein -
  EGX58_RS08710 (EGX58_08720) - 1732055..1732519 (-) 465 WP_002455129.1 low molecular weight protein-tyrosine-phosphatase -
  EGX58_RS08715 (EGX58_08725) - 1732661..1732867 (+) 207 WP_002450082.1 DUF1128 domain-containing protein -
  EGX58_RS08720 (EGX58_08730) - 1732879..1734126 (+) 1248 WP_103288029.1 aminopeptidase -
  EGX58_RS08725 (EGX58_08735) - 1734159..1734692 (+) 534 WP_002450051.1 acyl-CoA thioesterase -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 39657.23 Da        Isoelectric Point: 6.3137

>NTDB_id=325157 EGX58_RS08690 WP_002450020.1 1728723..1729757(+) (vraS) [Staphylococcus hominis strain FDAARGOS_575]
MNHYLRAIGSMLILVYSMLTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLVIILLCIIVGSVLAYKINQQNDWIKN
QIEHAIEGETVGINDKNIELYNETIDIYQMLVPLNQELQRLRIKTQNLTNENYNMNDIKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETELAPPLNQQIPVLEKMIQESQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVIYDI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNHQDYLLLRIQDNGKGFNVDEKVEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLTKEEG

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=325157 EGX58_RS08690 WP_002450020.1 1728723..1729757(+) (vraS) [Staphylococcus hominis strain FDAARGOS_575]
ATGAATCACTATTTAAGAGCAATAGGATCCATGCTTATTTTAGTGTATAGCATGCTAACTGCGTTTTTATTTATAGATAA
AGTTTTTGTAAATATTATATATTTTCAAGGAATGTTCTATACTCAAATATTTGGTATACCTGTGTTTCTATTTCTTAATT
TAGTGATTATTTTACTTTGTATTATCGTTGGCTCTGTATTAGCTTATAAAATAAATCAGCAAAATGATTGGATAAAGAAT
CAAATTGAACATGCCATTGAAGGCGAAACGGTAGGGATTAATGATAAAAATATAGAACTATATAATGAGACAATTGATAT
TTATCAAATGTTAGTGCCTTTAAATCAAGAATTACAGAGATTAAGAATTAAAACTCAAAATTTAACAAATGAAAACTATA
ATATGAATGACATTAAAGTTAAAAAAATCATAGAAGATGAGCGTCAGCGTTTAGCAAGGGAACTACACGATTCAGTAAGT
CAACAACTTTTCGCAGCAAGTATGATGCTATCAGCGATAAAAGAAACAGAACTAGCACCACCTCTTAATCAACAAATTCC
AGTACTTGAGAAAATGATACAAGAATCTCAATTAGAGATGCGAGCGCTATTACTACATTTGCGACCTTTAGGACTCAAAG
ATAAATCATTAGGGGAAGGTATTAAAGATTTAGTCATTGATTTACAAAAGAAAGTACCTATGAAAGTCATTTATGATATA
CAAGATTTTAAAGTTCCTAAAGGAATTGAAGATCATCTATTTCGAATTACACAAGAGGCAATTTCAAATACATTAAGACA
TTCTAATGGAACTAAAGTGACAGTAGAATTATTTAATCATCAAGATTATTTATTATTAAGAATTCAGGATAATGGTAAAG
GTTTTAACGTAGATGAAAAAGTAGAACAAAGTTATGGATTGAAAAATATGAGAGAACGTGCATTAGAAATAGGTGCAACG
TTTCATATCGTATCTTTACCAGATTCAGGAACTAGAATAGAGGTAAAAGCACCTTTAACGAAAGAGGAGGGTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

89.826

100

0.898


Multiple sequence alignment