Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EGX58_RS08130 | Genome accession | NZ_CP033732 |
| Coordinates | 1616638..1617033 (+) | Length | 131 a.a. |
| NCBI ID | WP_002448700.1 | Uniprot ID | - |
| Organism | Staphylococcus hominis strain FDAARGOS_575 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1611638..1622033
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGX58_RS08100 (EGX58_08110) | atpD | 1611743..1613155 (+) | 1413 | WP_002448706.1 | F0F1 ATP synthase subunit beta | - |
| EGX58_RS08105 (EGX58_08115) | - | 1613177..1613578 (+) | 402 | WP_002448708.1 | F0F1 ATP synthase subunit epsilon | - |
| EGX58_RS08110 (EGX58_08120) | - | 1613887..1614117 (+) | 231 | WP_002448711.1 | DUF1146 family protein | - |
| EGX58_RS08115 (EGX58_08125) | murA | 1614224..1615489 (+) | 1266 | WP_002448704.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| EGX58_RS08120 (EGX58_08130) | fabZ | 1615517..1615954 (+) | 438 | WP_002448673.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| EGX58_RS08125 (EGX58_08135) | - | 1616004..1616444 (-) | 441 | WP_002448687.1 | YwpF-like family protein | - |
| EGX58_RS08130 (EGX58_08140) | ssb | 1616638..1617033 (+) | 396 | WP_002448700.1 | single-stranded DNA-binding protein | Machinery gene |
| EGX58_RS08135 (EGX58_08145) | - | 1617438..1618184 (+) | 747 | WP_103288307.1 | transglycosylase family protein | - |
| EGX58_RS08140 (EGX58_08150) | tenA | 1618575..1619264 (+) | 690 | WP_002455064.1 | thiaminase II | - |
| EGX58_RS08145 (EGX58_08155) | thiD | 1619257..1620078 (+) | 822 | WP_103288308.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| EGX58_RS08150 (EGX58_08160) | thiM | 1620071..1620859 (+) | 789 | WP_002448660.1 | hydroxyethylthiazole kinase | - |
| EGX58_RS08155 (EGX58_08165) | thiE | 1620862..1621500 (+) | 639 | WP_002448695.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15163.35 Da Isoelectric Point: 7.1326
>NTDB_id=325155 EGX58_RS08130 WP_002448700.1 1616638..1617033(+) (ssb) [Staphylococcus hominis strain FDAARGOS_575]
MLNKIVIVGRMTKDAKIYNNEEVKIATFSVATERNYKDENDEIACDYILCKAFGKMASNIEKYTSQGSLVGITGQMRSRK
YEKEKQTHFVTELYVETIKFMSPKLNNEKLSDNSLNTDTYPFDHLELMNIK
MLNKIVIVGRMTKDAKIYNNEEVKIATFSVATERNYKDENDEIACDYILCKAFGKMASNIEKYTSQGSLVGITGQMRSRK
YEKEKQTHFVTELYVETIKFMSPKLNNEKLSDNSLNTDTYPFDHLELMNIK
Nucleotide
Download Length: 396 bp
>NTDB_id=325155 EGX58_RS08130 WP_002448700.1 1616638..1617033(+) (ssb) [Staphylococcus hominis strain FDAARGOS_575]
ATGTTAAATAAGATAGTAATCGTTGGTCGTATGACTAAAGATGCAAAAATTTATAATAATGAGGAGGTGAAAATCGCAAC
GTTTAGTGTGGCTACTGAACGTAATTATAAAGATGAAAATGATGAAATAGCGTGTGACTATATATTGTGTAAAGCATTTG
GTAAGATGGCCAGTAACATTGAAAAATATACTTCTCAAGGATCATTAGTAGGTATTACTGGCCAAATGCGTTCTCGTAAA
TATGAAAAGGAAAAACAAACTCACTTTGTAACAGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATTAAATAA
TGAAAAACTCTCAGATAACTCACTAAATACAGACACTTATCCATTTGATCATCTCGAATTAATGAATATAAAATAA
ATGTTAAATAAGATAGTAATCGTTGGTCGTATGACTAAAGATGCAAAAATTTATAATAATGAGGAGGTGAAAATCGCAAC
GTTTAGTGTGGCTACTGAACGTAATTATAAAGATGAAAATGATGAAATAGCGTGTGACTATATATTGTGTAAAGCATTTG
GTAAGATGGCCAGTAACATTGAAAAATATACTTCTCAAGGATCATTAGTAGGTATTACTGGCCAAATGCGTTCTCGTAAA
TATGAAAAGGAAAAACAAACTCACTTTGTAACAGAATTATATGTTGAAACAATTAAATTTATGTCCCCTAAATTAAATAA
TGAAAAACTCTCAGATAACTCACTAAATACAGACACTTATCCATTTGATCATCTCGAATTAATGAATATAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
73.282 |
100 |
0.733 |
| ssb | Staphylococcus aureus MW2 |
72.519 |
100 |
0.725 |