Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   EFV54_RS11320 Genome accession   NZ_CP033607
Coordinates   2198129..2199415 (-) Length   428 a.a.
NCBI ID   WP_010906325.1    Uniprot ID   A0A2A9HU85
Organism   Lactococcus lactis strain IL1403     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2193129..2204415
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EFV54_RS11305 (EFV54_11305) - 2194320..2194856 (-) 537 WP_010906322.1 hypothetical protein -
  EFV54_RS11310 (EFV54_11310) - 2194862..2196193 (-) 1332 WP_010906323.1 FAD/NAD(P)-binding oxidoreductase -
  EFV54_RS11315 (EFV54_11315) - 2196209..2198059 (-) 1851 WP_010906324.1 proline--tRNA ligase -
  EFV54_RS11320 (EFV54_11320) eeP 2198129..2199415 (-) 1287 WP_010906325.1 RIP metalloprotease RseP Regulator
  EFV54_RS11325 (EFV54_11325) - 2199434..2200237 (-) 804 WP_003130590.1 phosphatidate cytidylyltransferase -
  EFV54_RS11330 (EFV54_11330) - 2200237..2200971 (-) 735 WP_010906326.1 isoprenyl transferase -
  EFV54_RS11335 (EFV54_11335) yajC 2201343..2201675 (-) 333 WP_003130588.1 preprotein translocase subunit YajC -
  EFV54_RS11340 (EFV54_11340) - 2201770..2202467 (-) 698 Protein_2198 DNA alkylation repair protein -
  EFV54_RS11345 (EFV54_11345) rlmH 2202486..2202965 (-) 480 WP_003130585.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  EFV54_RS11350 (EFV54_11350) - 2203004..2203951 (-) 948 WP_003130410.1 IS30 family transposase -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46422.95 Da        Isoelectric Point: 6.5146

>NTDB_id=324394 EFV54_RS11320 WP_010906325.1 2198129..2199415(-) (eeP) [Lactococcus lactis strain IL1403]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEVVNPEAENSVSNIVRRINLSEHVELEEAIPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSAGVFHKMLTNFGGPLNNFILGIIAFIVLTFVQGGVPSTTNAIGQVEKGTPAYNAGLKAGDKIEAV
NGTKTADWNNVVTEISGSKGKELKLEVSRSGKSETLSVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVQAGQSATAIFKA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGFPAIVYLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSQEKES
IITMVGVVFMLVLFVAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=324394 EFV54_RS11320 WP_010906325.1 2198129..2199415(-) (eeP) [Lactococcus lactis strain IL1403]
TTGATAGAAACACTGATTACTTTTATTATTATCTTTGGTATTATTGTCGCTATCCATGAATATGGCCATCTTTGGTGGGC
AAAACGTTCAGGAATTTTAGTGCGTGAATATGCCGTTGGAATGGGCCCGAAAATTTTTGCTCACCAAGCAAAAGATGGGA
CACTTTACACGATAAGAATTCTTCCACTCGGTGGCTATGTTCGTTTGGCTGGTTGGGGTGATGACAAGACTGAAATCAAA
AAAGGACAAGCTGCAAGTCTTGTTGTCAGTAAATCTGAAGTAGTAAATCCAGAAGCTGAAAATTCTGTCAGTAATATCGT
CAGAAGAATTAATCTGTCAGAACATGTTGAATTAGAAGAAGCAATTCCCATGTTGATTACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTTTTTGGGGAAATCAAACGTTATTCTGTTGATCATGATGCAACAATCATTGAAGAAGAT
GGAACAGAAGTTCGGATTGCACCACTCGATGTTCAATATCAATCAGCCGGTGTCTTTCATAAAATGTTGACAAACTTCGG
TGGTCCTTTGAATAACTTTATTTTAGGAATCATTGCTTTTATCGTTCTAACCTTTGTTCAAGGAGGCGTTCCTTCAACTA
CTAATGCTATTGGCCAAGTTGAAAAAGGAACACCCGCTTACAATGCAGGCTTAAAAGCTGGTGATAAAATTGAAGCAGTC
AATGGAACTAAAACGGCAGATTGGAACAATGTTGTTACTGAAATTTCAGGTTCTAAAGGAAAAGAATTAAAACTTGAAGT
TAGCCGTTCAGGCAAATCGGAAACCTTATCAGTTACACCTAAAAAAATGGACGGAAGTTACCGTGTTGGCATTATGCAAT
CAATGAAAACAGGTTTCTTTGATAAGATTACAGGTGGCTTTGTTCAAGCAGGCCAATCAGCTACAGCAATCTTTAAAGCT
TTAGGAAGTTTGATTGCACGACCGAGTCTTGATAAACTTGGTGGCCCAGTTGCTATTTATCAACTCAGTGGTCAAGCCGC
GAGAGCAGGTTTTCCAGCTATTGTCTATCTTTTAGCTATGCTTTCAATTAATTTAGGGATTGTCAATCTTTTTCCTATTC
CAGTACTTGATGGTGGAAAAATTGTCCTAAATATTATTGAAGCAATTCGTGGCAAAGCACTCTCACAAGAAAAGGAATCA
ATCATCACAATGGTAGGAGTTGTCTTCATGCTTGTGCTCTTTGTAGCAGTAACATGGAATGATATTCTCCGAGCCTTTGT
AAATTAA

Domains


Predicted by InterproScan.

(218-269)

(7-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2A9HU85

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.613

100

0.57

  eeP Streptococcus thermophilus LMD-9

56.381

100

0.568


Multiple sequence alignment