Detailed information NTG0323356

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: FDP16_RS11210
• Genome accession: NZ_CP040798
• Coordinates: 2241022..2242248 (-)
• Length: 408 a.a.
• NCBI ID: WP_176799685.1
• Uniprot ID: -
• Organism: Streptococcus sanguinis strain CGMH058
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2236022..2247248

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FDP16_RS11185 (FDP16_11665)	-	2237297..2238733 (-)	1437	WP_176799681.1	VWA domain-containing protein	-
FDP16_RS11190 (FDP16_11670)	-	2238754..2239215 (-)	462	WP_176799822.1	hypothetical protein	-
FDP16_RS11195 (FDP16_11675)	-	2239374..2239817 (-)	444	WP_176799682.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
FDP16_RS11200 (FDP16_11680)	-	2239858..2240301 (-)	444	WP_176799683.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
FDP16_RS11205 (FDP16_11685)	-	2240406..2240849 (-)	444	WP_176799684.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
FDP16_RS11210 (FDP16_11690)	pilC	2241022..2242248 (-)	1227	WP_176799685.1	type II secretion system F family protein	Machinery gene
FDP16_RS11215 (FDP16_11695)	pilT	2242252..2243316 (-)	1065	WP_002899359.1	type IV pilus twitching motility protein PilT	Machinery gene
FDP16_RS11220 (FDP16_11700)	pilB	2243318..2245000 (-)	1683	WP_176799686.1	GspE/PulE family protein	Machinery gene
FDP16_RS11225 (FDP16_11705)	-	2246120..2247007 (-)	888	WP_176799687.1	cation diffusion facilitator family transporter	-

Sequence

Protein

• Length: 408 a.a.
• Molecular weight: 44758.77 Da
• Isoelectric Point: 9.0654

>NTDB_id=323356 FDP16_RS11210 WP_176799685.1 2241022..2242248(-) (pilC) [Streptococcus sanguinis strain CGMH058]
MTVYVCKYLDTRQGVVTLEVDAPNRTDAVNRIRLKGKPISVEEKVMGSKEITLFQSKKIKLKDISLFCKQMSVMLNSGIP
LNNAVDILEQQTDAKNLKASLKVISKGLKEGNQLSKALIEQNGLYPDLLIRMVQAGEKTGKLDEVLEKMSEHYNKELKTS
RQIRGAMIYPAVLAFLAVAATLVLLYVVIPNFSGIFEQSGVALPLPTRIVLAASNFVQSYWYILFGVVGLLVFLFLRYRS
TEAGRYQLDHLKLWLPVIKGPMQKIVTARFASTLATLTSAGIPLVEAIESAAATTNNAVVIDKLRVANEGLQKGERLTGM
LTATGLFPPMMLSMVKIGEESGSLESMLNKTSDFYEEELEAAIKQLLSLLEPAMIIIMGVIIGGIVASVMLPMFEIANAV
QQGAEANQ

Nucleotide

• Length: 1227 bp

>NTDB_id=323356 FDP16_RS11210 WP_176799685.1 2241022..2242248(-) (pilC) [Streptococcus sanguinis strain CGMH058]
ATGACAGTATATGTTTGTAAATACTTAGACACTCGGCAAGGGGTCGTCACACTAGAGGTGGATGCTCCTAACCGGACAGA
CGCCGTCAATCGGATCCGTCTCAAAGGGAAGCCGATCAGTGTCGAAGAAAAGGTCATGGGCTCTAAGGAAATCACCCTTT
TCCAAAGCAAGAAAATCAAGCTCAAGGACATATCACTCTTCTGTAAGCAGATGTCGGTTATGTTAAACTCGGGTATCCCG
CTCAACAATGCAGTAGATATCTTAGAGCAGCAGACAGATGCCAAAAACTTGAAGGCAAGTCTGAAGGTTATCAGTAAAGG
CCTGAAGGAAGGGAATCAGCTGTCCAAGGCTCTAATCGAGCAAAATGGTCTTTATCCCGACCTCTTAATCCGCATGGTGC
AGGCTGGTGAAAAGACTGGTAAGCTGGATGAAGTGCTGGAAAAGATGTCTGAGCACTATAACAAAGAGCTCAAGACCAGC
CGCCAGATTCGCGGAGCTATGATTTATCCCGCAGTCCTTGCTTTTTTGGCAGTGGCTGCAACTCTGGTCTTACTCTATGT
CGTTATCCCCAACTTCTCGGGAATCTTTGAGCAGAGTGGTGTAGCATTACCTTTGCCGACACGTATCGTCTTGGCAGCTA
GTAACTTTGTCCAATCTTACTGGTATATCCTCTTTGGTGTGGTTGGTCTTCTAGTCTTCCTCTTCCTGCGTTATCGCAGT
ACAGAGGCAGGCCGCTACCAGCTGGACCATCTCAAACTTTGGCTACCGGTCATCAAGGGACCAATGCAGAAGATTGTTAC
TGCTCGTTTTGCCAGCACCTTGGCTACTCTTACCAGTGCGGGTATCCCTTTGGTCGAGGCCATTGAGTCAGCTGCCGCAA
CGACCAATAACGCTGTTGTTATTGATAAGCTGAGAGTGGCAAATGAAGGGCTGCAAAAAGGGGAACGTCTAACGGGAATG
CTGACCGCAACAGGTCTCTTCCCACCTATGATGCTCTCGATGGTCAAGATTGGTGAGGAGTCTGGGTCTCTGGAGTCCAT
GCTCAATAAAACATCGGATTTTTATGAAGAAGAGCTTGAAGCAGCTATCAAGCAGTTGCTCTCACTCTTGGAGCCAGCTA
TGATCATTATCATGGGGGTCATCATCGGAGGTATCGTTGCCTCTGTTATGCTGCCAATGTTTGAAATCGCCAATGCTGTT
CAACAGGGCGCTGAAGCAAATCAATAA

Domains

Predicted by InterProScan.

• Type II secretion system (T2SS), protein F (T2SSF) (67-190)

• Type II secretion system (T2SS), protein F (T2SSF) (270-392)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Legionella pneumophila strain ERS1305867	37.887	95.098	0.36