Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   FGE23_RS13345 Genome accession   NZ_CP040672
Coordinates   2620173..2621441 (+) Length   422 a.a.
NCBI ID   WP_007611459.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain X030     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2615173..2626441
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGE23_RS13320 pyrH 2615968..2616690 (+) 723 WP_003154213.1 UMP kinase -
  FGE23_RS13325 frr 2616693..2617250 (+) 558 WP_003154212.1 ribosome recycling factor -
  FGE23_RS13330 - 2617376..2618158 (+) 783 WP_003154211.1 isoprenyl transferase -
  FGE23_RS13335 - 2618162..2618959 (+) 798 WP_146276782.1 phosphatidate cytidylyltransferase -
  FGE23_RS13340 dxr 2619015..2620166 (+) 1152 WP_146276784.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  FGE23_RS13345 eeP 2620173..2621441 (+) 1269 WP_007611459.1 RIP metalloprotease RseP Regulator
  FGE23_RS13350 proS 2621473..2623167 (+) 1695 WP_003154202.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46540.43 Da        Isoelectric Point: 6.5185

>NTDB_id=323101 FGE23_RS13345 WP_007611459.1 2620173..2621441(+) (eeP) [Bacillus amyloliquefaciens strain X030]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKDDEVEKVIINQKEKYPDALIIEVETADLEHEMKITGYEQGKEDELAGFTVSQTSFFIVDGEEVQIAPYN
RQFGSKPVWKRIKAIAAGPIMNFILAYVILVMLGFIQGVPSNQPELGKLTDNGRAAAAGLKEGDYIQSINGEKMRSWTDI
VTAVKENPGKKIDVAVKRDGKSFHISVTPEAVKDENKKTIGRFGSYAPTEKGALAAIAYGATSTVDVTKAILTNLSKLVT
GQFKLDMLSGPVGIYDMTDQVAKTGIINLFQFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINRDKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=323101 FGE23_RS13345 WP_007611459.1 2620173..2621441(+) (eeP) [Bacillus amyloliquefaciens strain X030]
ATGTTCGTGAATACAGTTATCGCGTTTATTATTATTTTCGGAACGCTCGTTTTTTTCCATGAGCTCGGGCATTTATTGCT
CGCCCAAAGAGCGGGAATCCTTTGCCGTGAATTTGCGATCGGCTTCGGCCCTAAAATCTTTTCATTTAAAAAGAATGAAA
CCGTGTATACGATCAGACTCCTTCCGGTCGGGGGGTTCGTCCGCATGGCCGGTGAAGACCCGGAGATGATTGAAGTCAAA
CCCGGTTATACCGTCGGGCTTCTTTTTAATAAAGATGACGAAGTGGAAAAAGTCATCATTAATCAAAAGGAAAAATATCC
CGACGCTTTAATTATCGAGGTGGAGACGGCTGATCTTGAGCACGAAATGAAGATTACCGGGTACGAGCAGGGGAAAGAAG
ATGAACTGGCGGGCTTTACTGTCAGTCAGACCTCTTTTTTTATCGTAGACGGAGAAGAAGTGCAGATTGCGCCTTACAAT
CGACAATTCGGGTCTAAACCCGTATGGAAGCGGATTAAGGCGATTGCTGCCGGTCCGATAATGAACTTCATCTTAGCGTA
TGTCATTCTCGTCATGCTCGGATTCATTCAAGGCGTGCCTTCGAATCAGCCTGAGCTCGGGAAGCTGACAGACAATGGAC
GCGCAGCTGCTGCCGGTTTAAAAGAAGGCGACTATATCCAGAGCATTAACGGTGAAAAAATGAGGTCATGGACCGACATC
GTGACAGCAGTAAAAGAAAATCCCGGGAAAAAAATCGATGTCGCCGTCAAACGGGACGGCAAATCGTTTCATATCTCGGT
TACACCTGAAGCTGTAAAAGATGAAAATAAAAAAACAATCGGCCGCTTCGGCTCTTATGCGCCGACTGAAAAAGGCGCGC
TTGCAGCGATTGCTTACGGCGCGACATCTACCGTTGATGTCACAAAAGCGATCCTGACCAATCTGAGCAAACTTGTGACA
GGCCAGTTTAAGCTTGATATGCTTTCGGGCCCTGTCGGCATTTATGATATGACCGATCAAGTTGCAAAAACCGGTATTAT
CAACTTATTCCAGTTTGCGGCGTTTTTAAGCATCAACCTGGGAATCGTCAACCTGCTGCCGATACCGGCGCTTGACGGCG
GACGGCTGCTGTTTTTATTCATTGAAGCAATCCGCGGCAAGCCGATAAACCGTGACAAGGAAGCATTTGTCGTATTTATC
GGCGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGTTTATTCTTATAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_6)

(212-258)

Peptidase family M50 (Peptidase_M50)

(8-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.535

100

0.403
  eeP Streptococcus thermophilus LMG 18311

39.671

100

0.4