Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   EB817_RS09375 Genome accession   NZ_CP033336
Coordinates   54178..54276 (+) Length   32 a.a.
NCBI ID   WP_020833188.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY165     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 49178..59276
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EB817_RS00325 (EB817_00325) - 50038..51735 (+) 1698 WP_129304353.1 AIPR family protein -
  EB817_RS00330 (EB817_00330) purB 51753..53045 (+) 1293 WP_129304355.1 adenylosuccinate lyase -
  EB817_RS00335 (EB817_00335) comR 53176..54087 (+) 912 WP_011888526.1 XRE family transcriptional regulator Regulator
  EB817_RS09375 comS 54178..54276 (+) 99 WP_020833188.1 quorum-sensing system DWW-type pheromone Regulator
  EB817_RS00340 (EB817_00340) ruvB 54307..55305 (+) 999 WP_014407198.1 Holliday junction branch migration DNA helicase RuvB -
  EB817_RS00345 (EB817_00345) - 55443..55880 (+) 438 WP_002994668.1 low molecular weight phosphotyrosine protein phosphatase -
  EB817_RS00350 (EB817_00350) - 55903..56304 (+) 402 WP_012560369.1 MORN repeat-containing protein -
  EB817_RS00355 (EB817_00355) - 56301..58076 (+) 1776 WP_129304357.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 32 a.a.        Molecular weight: 3758.63 Da        Isoelectric Point: 10.7919

>NTDB_id=323099 EB817_RS09375 WP_020833188.1 54178..54276(+) (comS) [Streptococcus pyogenes strain TSPY165]
MLKKVKPFLLLAAVVAFKVARVMHEFDWWNLG

Nucleotide


Download         Length: 99 bp        

>NTDB_id=323099 EB817_RS09375 WP_020833188.1 54178..54276(+) (comS) [Streptococcus pyogenes strain TSPY165]
ATGTTAAAAAAAGTTAAGCCATTTTTACTATTAGCCGCAGTAGTTGCATTTAAAGTTGCTCGTGTAATGCATGAATTTGA
TTGGTGGAATCTTGGTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS315

100

100

1
  comS Streptococcus pyogenes MGAS8232

45.161

96.875

0.437

Multiple sequence alignment