Detailed information NTG0323092

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: FGE23_RS12590
• Genome accession: NZ_CP040672
• Coordinates: 2470208..2471230 (+)
• Length: 340 a.a.
• NCBI ID: WP_146276714.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain X030
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 2465208..2476230

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGE23_RS12550	-	2465567..2465806 (+)	240	WP_003154475.1	YlbE-like family protein	-
FGE23_RS12555	ylbF	2465877..2466326 (+)	450	WP_003154472.1	YlbF family regulator	Regulator
FGE23_RS12560	-	2466385..2466657 (+)	273	WP_003154470.1	YlbG family protein	-
FGE23_RS12570	rsmD	2466957..2467511 (+)	555	WP_007409693.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
FGE23_RS12575	coaD	2467516..2467998 (+)	483	WP_014417707.1	pantetheine-phosphate adenylyltransferase	-
FGE23_RS12580	ylbJ	2468017..2469243 (-)	1227	WP_070081783.1	sporulation integral membrane protein YlbJ	-
FGE23_RS12585	-	2469423..2470202 (+)	780	WP_014304961.1	patatin family protein	-
FGE23_RS12590	sepM	2470208..2471230 (+)	1023	WP_146276714.1	SepM family pheromone-processing serine protease	Regulator
FGE23_RS12595	-	2471249..2472496 (-)	1248	WP_146276716.1	nucleotidyltransferase	-
FGE23_RS12600	-	2472705..2473223 (+)	519	WP_003154459.1	DUF177 domain-containing protein	-
FGE23_RS12605	rpmF	2473245..2473424 (+)	180	WP_003154457.1	50S ribosomal protein L32	-
FGE23_RS12610	gerR	2473583..2474158 (+)	576	WP_003154450.1	sporulation-specific transcriptional regulator GerR	-
FGE23_RS12615	-	2474199..2474681 (-)	483	WP_003154449.1	N-acetyltransferase	-
FGE23_RS12620	-	2474844..2475725 (+)	882	WP_225979750.1	2-dehydropantoate 2-reductase	-

Sequence

Protein

• Length: 340 a.a.
• Molecular weight: 37390.91 Da
• Isoelectric Point: 7.3848

>NTDB_id=323092 FGE23_RS12590 WP_146276714.1 2470208..2471230(+) (sepM) [Bacillus amyloliquefaciens strain X030]
MKAKHFRWVFIILILLIAVTFIKLPYYITQPGEASELRPLIKVDGGYPEKGSLSLMTVKVGPANPYTYLWAKVHPYDEIV
PDESIKEEGESDSDYMKRQLQMMKSSQENAVIAAYQKAGKQVKYSFNGIFASSVVSDMPAKGKIEVGDKIISADGKTYES
AEKLIDYISSKKAGEKVTFHIERDTKEKTADIVLKSFPDDPKRAGIGVALYTDRNVKVKPDLHFSIENIGGPSAGLMMSL
EIYNQLTKPDETKGYNIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGAENSDYKNAVKTAKAIKSDMKIV
PVDTMQDALDYLDQLKVKST

Nucleotide

• Length: 1023 bp

>NTDB_id=323092 FGE23_RS12590 WP_146276714.1 2470208..2471230(+) (sepM) [Bacillus amyloliquefaciens strain X030]
ATGAAAGCAAAACATTTTCGCTGGGTGTTTATCATCCTGATCTTATTAATTGCTGTTACATTTATTAAGCTTCCGTATTA
CATTACACAGCCGGGAGAAGCATCAGAGCTGAGACCGCTGATTAAGGTGGACGGAGGCTATCCTGAAAAAGGAAGCCTTT
CCTTGATGACTGTCAAAGTAGGCCCCGCCAATCCGTATACATATCTTTGGGCGAAAGTGCATCCTTACGATGAAATCGTC
CCTGATGAAAGCATAAAAGAAGAGGGCGAATCGGACTCGGATTATATGAAGCGCCAGCTGCAAATGATGAAAAGCTCCCA
AGAAAACGCGGTCATTGCCGCTTATCAAAAAGCCGGGAAACAGGTGAAATACTCATTTAACGGGATTTTCGCCAGCTCAG
TCGTCTCTGACATGCCGGCAAAAGGAAAAATAGAGGTCGGTGATAAAATCATCAGCGCGGACGGGAAAACATACGAATCC
GCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGGGAAAAAGTAACGTTTCACATTGAACGGGACACGAAAGA
AAAGACCGCTGACATTGTGCTGAAATCATTCCCGGACGACCCGAAAAGAGCGGGAATCGGCGTAGCGTTATATACGGACC
GGAACGTGAAAGTAAAGCCGGATCTCCATTTCAGCATTGAAAACATCGGCGGGCCTTCTGCGGGTCTCATGATGTCTTTA
GAAATTTACAACCAGCTGACAAAACCTGACGAAACAAAAGGCTATAATATAGCCGGAACGGGGACAATCGACGTGGACGG
CAAGGTCGGACCGATCGGCGGAATCGATCAGAAAGTCGTCGCCGCAGACAAAGCGGGAAAAGATATTTTCTTTGCGCCGA
ATCAAAACGGAGCTGAAAATTCTGATTACAAAAATGCGGTAAAAACGGCGAAAGCAATCAAGTCCGATATGAAGATCGTC
CCTGTCGACACCATGCAGGACGCACTTGACTATTTGGATCAGCTGAAAGTAAAAAGCACCTGA

Domains

Predicted by InterProScan.

• PDZ domain (PDZ_2) (128-193)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (230-330)

• Peptidase family M50 (Peptidase_M50) (100-218)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	38.953	100	0.394