Detailed information
Bioinformatically predicted
Overview
| Name | ylbF | Type | Regulator |
| Locus tag | FGE23_RS12555 | Genome accession | NZ_CP040672 |
| Coordinates | 2465877..2466326 (+) | Length | 149 a.a. |
| NCBI ID | WP_003154472.1 | Uniprot ID | A7Z4C2 |
| Organism | Bacillus amyloliquefaciens strain X030 | ||
| Function | accelerate the production of Spo0A~P (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2460877..2471326
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGE23_RS12515 | ctaE | 2461008..2461631 (+) | 624 | WP_003154482.1 | cytochrome c oxidase subunit III | - |
| FGE23_RS12520 | ctaF | 2461634..2461966 (+) | 333 | WP_015388278.1 | cytochrome c oxidase subunit IVB | - |
| FGE23_RS12525 | ctaG | 2461991..2462875 (+) | 885 | WP_003154480.1 | cytochrome c oxidase assembly factor CtaG | - |
| FGE23_RS12530 | - | 2462909..2463268 (-) | 360 | WP_007409688.1 | YugN family protein | - |
| FGE23_RS12535 | - | 2463409..2463852 (+) | 444 | WP_003154478.1 | CBS domain-containing protein | - |
| FGE23_RS12540 | - | 2463937..2464977 (+) | 1041 | WP_003154477.1 | CAP domain-containing protein | - |
| FGE23_RS12545 | - | 2465141..2465551 (+) | 411 | WP_070081781.1 | YlbD family protein | - |
| FGE23_RS12550 | - | 2465567..2465806 (+) | 240 | WP_003154475.1 | YlbE-like family protein | - |
| FGE23_RS12555 | ylbF | 2465877..2466326 (+) | 450 | WP_003154472.1 | YlbF family regulator | Regulator |
| FGE23_RS12560 | - | 2466385..2466657 (+) | 273 | WP_003154470.1 | YlbG family protein | - |
| FGE23_RS12570 | rsmD | 2466957..2467511 (+) | 555 | WP_007409693.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| FGE23_RS12575 | coaD | 2467516..2467998 (+) | 483 | WP_014417707.1 | pantetheine-phosphate adenylyltransferase | - |
| FGE23_RS12580 | ylbJ | 2468017..2469243 (-) | 1227 | WP_070081783.1 | sporulation integral membrane protein YlbJ | - |
| FGE23_RS12585 | - | 2469423..2470202 (+) | 780 | WP_014304961.1 | patatin family protein | - |
| FGE23_RS12590 | sepM | 2470208..2471230 (+) | 1023 | WP_146276714.1 | SepM family pheromone-processing serine protease | Regulator |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16777.86 Da Isoelectric Point: 4.8089
>NTDB_id=323091 FGE23_RS12555 WP_003154472.1 2465877..2466326(+) (ylbF) [Bacillus amyloliquefaciens strain X030]
MYATIESVKLQSEAEQLAGMILQSETAENYRDCYKRLREDEEAGRIIRSFMSVKEQYEDVQRFGKYHPDYREISRKMREM
KRELDLNDKVAEFKKAETELQSLLDEISIELGTAVSEHVKVPTGNPYFDGLSSCGGGCGSGGGCGCKVS
MYATIESVKLQSEAEQLAGMILQSETAENYRDCYKRLREDEEAGRIIRSFMSVKEQYEDVQRFGKYHPDYREISRKMREM
KRELDLNDKVAEFKKAETELQSLLDEISIELGTAVSEHVKVPTGNPYFDGLSSCGGGCGSGGGCGCKVS
Nucleotide
Download Length: 450 bp
>NTDB_id=323091 FGE23_RS12555 WP_003154472.1 2465877..2466326(+) (ylbF) [Bacillus amyloliquefaciens strain X030]
ATGTATGCAACAATTGAGTCCGTCAAGCTTCAAAGTGAAGCGGAGCAGCTTGCCGGCATGATTCTGCAGTCTGAGACGGC
TGAAAATTACCGCGATTGTTACAAGCGTCTCCGTGAAGATGAAGAGGCAGGGCGGATCATTCGTTCTTTTATGAGCGTTA
AAGAGCAGTATGAGGATGTGCAGCGTTTTGGCAAATACCATCCTGATTATAGAGAGATTTCCCGCAAAATGAGAGAAATG
AAGCGGGAGCTCGATTTAAACGATAAGGTGGCCGAATTTAAAAAAGCGGAGACTGAGCTTCAGTCGCTGCTTGACGAGAT
CAGCATTGAACTCGGAACGGCCGTCTCGGAGCATGTAAAAGTGCCGACGGGGAATCCTTATTTTGACGGCCTGTCATCCT
GCGGCGGCGGCTGCGGTTCCGGCGGCGGCTGCGGATGCAAAGTTTCCTGA
ATGTATGCAACAATTGAGTCCGTCAAGCTTCAAAGTGAAGCGGAGCAGCTTGCCGGCATGATTCTGCAGTCTGAGACGGC
TGAAAATTACCGCGATTGTTACAAGCGTCTCCGTGAAGATGAAGAGGCAGGGCGGATCATTCGTTCTTTTATGAGCGTTA
AAGAGCAGTATGAGGATGTGCAGCGTTTTGGCAAATACCATCCTGATTATAGAGAGATTTCCCGCAAAATGAGAGAAATG
AAGCGGGAGCTCGATTTAAACGATAAGGTGGCCGAATTTAAAAAAGCGGAGACTGAGCTTCAGTCGCTGCTTGACGAGAT
CAGCATTGAACTCGGAACGGCCGTCTCGGAGCATGTAAAAGTGCCGACGGGGAATCCTTATTTTGACGGCCTGTCATCCT
GCGGCGGCGGCTGCGGTTCCGGCGGCGGCTGCGGATGCAAAGTTTCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ylbF | Bacillus subtilis subsp. subtilis str. 168 |
87.919 |
100 |
0.879 |