Detailed information NTG0323086

Bioinformatically predicted

Overview

• Name: clpE
• Type: Regulator
• Locus tag: FGE23_RS11865
• Genome accession: NZ_CP040672
• Coordinates: 2292334..2294430 (-)
• Length: 698 a.a.
• NCBI ID: WP_146276648.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain X030
• Function: repress competence development (at the early growth phase) (predicted from homology) Competence regulation

Genomic Context

Location: 2287334..2299430

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGE23_RS11840	-	2287924..2288184 (+)	261	WP_003154690.1	aspartyl-phosphate phosphatase Spo0E family protein	-
FGE23_RS11845	-	2288395..2289912 (-)	1518	WP_050556563.1	ATP-binding protein	-
FGE23_RS11850	-	2290111..2290557 (+)	447	WP_003154686.1	MarR family winged helix-turn-helix transcriptional regulator	-
FGE23_RS11855	motB	2290593..2291378 (-)	786	WP_069473375.1	flagellar motor protein MotB	-
FGE23_RS11860	motA	2291350..2292165 (-)	816	WP_003154684.1	flagellar motor stator protein MotA	-
FGE23_RS11865	clpE	2292334..2294430 (-)	2097	WP_146276648.1	ATP-dependent protease ATP-binding subunit ClpE	Regulator
FGE23_RS11875	-	2294832..2295869 (+)	1038	WP_070081724.1	hypothetical protein	-
FGE23_RS11880	-	2295967..2297088 (+)	1122	WP_146276650.1	hypothetical protein	-
FGE23_RS11885	queC	2297341..2298000 (+)	660	WP_003154679.1	7-cyano-7-deazaguanine synthase QueC	-
FGE23_RS11890	queD	2298001..2298441 (+)	441	WP_025650398.1	6-carboxytetrahydropterin synthase QueD	-
FGE23_RS11895	queE	2298434..2299165 (+)	732	WP_085341938.1	7-carboxy-7-deazaguanine synthase QueE	-

Sequence

Protein

• Length: 698 a.a.
• Molecular weight: 77800.85 Da
• Isoelectric Point: 5.3690

>NTDB_id=323086 FGE23_RS11865 WP_146276648.1 2292334..2294430(-) (clpE) [Bacillus amyloliquefaciens strain X030]
MRCQHCQKNEATIRLNMQVNSIQKQFVLCETCYTELTRKPSMSMGPQSFGFPFEQGFAPNQNKQQAGPEKGKLDELAQNV
TNGAKAGLIDPVIGRDNEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIAEGDVPNKLKNKELYLLDVASLVAN
TGIRGQFEERMKQLMNELKERKNVILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIGATTLKEYRQIEKDAALE
RRFQPVMVHEPTIEQAISILEGIKDKYEKYHGVTFSNEAINACVTLSSRYIQDRHLPDKAIDLLDEAGSKANLELDTVNE
EDAAERLKAIDAEKTKALREENYELAAKLRDEEAALEKQLAHETPASSPEIGAEHIQAIIEQKTGIPVGKLQADEQVKMK
ELEEHLHQRVIGQEKAVKKVAKAVRRSRAGLKSKNRPVGSFLFVGPTGVGKTELSKTLADELFGTKDSIIRLDMSEYMEK
HAVSKIIGSPPGYVGHDEAGQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVLIMTSNA
GTGEKQVKVGFQSEESVMEEQTLIDSLSAFFKPEFLNRFDSIIEFQSLKKEHLVKIVSLLLTELEDTLKERGISLSVTDD
AKEKIAEIGYHPAFGARPLRRTIQELIEDEMTDLLLDDNEIKAFHVVMEEDGIKVRAQ

Nucleotide

• Length: 2097 bp

>NTDB_id=323086 FGE23_RS11865 WP_146276648.1 2292334..2294430(-) (clpE) [Bacillus amyloliquefaciens strain X030]
ATGCGTTGTCAACATTGTCAGAAAAACGAGGCGACGATTCGCCTGAACATGCAAGTCAATTCCATTCAAAAACAATTCGT
TTTATGTGAAACATGTTATACAGAATTAACCCGAAAACCGTCTATGAGCATGGGGCCGCAATCATTCGGATTCCCGTTTG
AGCAAGGTTTCGCTCCCAATCAAAATAAACAGCAGGCCGGCCCTGAAAAAGGCAAGCTCGACGAGCTCGCTCAAAACGTC
ACAAACGGCGCAAAAGCAGGTCTGATTGACCCTGTGATCGGCCGCGATAATGAAGTGGCGCGCGTAATTGAAATTTTGAA
CCGCCGGAATAAAAACAATCCGGTGCTGATCGGTGAGCCGGGCGTCGGTAAAACGGCTATTGCAGAAGGCCTCGCGCTTA
AAATCGCTGAAGGCGATGTGCCGAACAAATTGAAAAACAAAGAGCTTTACCTGCTTGACGTCGCTTCTCTCGTCGCCAAT
ACAGGGATCAGAGGCCAGTTTGAAGAAAGAATGAAACAATTAATGAACGAATTAAAAGAACGGAAAAATGTCATCTTGTT
CATTGATGAGATTCACCTTCTTGTAGGCGCCGGCTCTGCCGAGGGATCAATGGATGCCGGGAACATCCTGAAACCGGCGC
TTGCCAGAGGCGAGCTGCAGGTCATCGGGGCGACAACGCTGAAAGAGTACCGCCAGATTGAAAAAGATGCGGCGCTTGAA
AGACGCTTCCAGCCTGTCATGGTTCACGAGCCTACAATAGAACAAGCCATCAGCATTCTGGAAGGCATTAAAGATAAATA
CGAGAAATACCACGGCGTCACATTCAGCAATGAAGCGATAAACGCCTGTGTTACGCTTTCATCCCGTTACATTCAGGACC
GCCACCTGCCGGATAAAGCGATCGACTTATTAGATGAAGCCGGCTCTAAGGCGAACCTGGAACTTGATACCGTAAATGAA
GAAGATGCGGCTGAGAGACTCAAAGCAATTGACGCGGAGAAAACAAAAGCGCTTCGGGAAGAAAATTATGAGCTTGCCGC
GAAACTGCGTGATGAAGAAGCTGCTTTGGAAAAGCAGCTGGCGCATGAAACACCGGCCTCTTCACCTGAAATCGGTGCGG
AGCATATTCAAGCCATCATTGAACAGAAAACAGGCATTCCGGTCGGAAAACTCCAGGCTGATGAACAAGTCAAAATGAAG
GAACTTGAAGAGCATCTTCATCAGCGTGTCATCGGTCAGGAAAAAGCCGTGAAAAAAGTGGCGAAAGCGGTCAGACGAAG
CCGCGCCGGCTTAAAATCCAAAAACAGACCTGTCGGCTCCTTCCTCTTTGTCGGACCGACCGGAGTCGGAAAAACCGAGT
TATCAAAGACACTCGCAGATGAACTGTTCGGTACAAAAGATTCCATTATCCGTCTCGATATGAGTGAATACATGGAAAAA
CACGCCGTATCAAAAATTATCGGTTCACCGCCGGGATATGTCGGACACGATGAAGCCGGTCAATTAACGGAAAAAGTGCG
CCGCAATCCGTACAGCATCGTGCTGCTCGACGAGATTGAAAAAGCCCATCCTGATGTCCAGCATATGTTTCTGCAGATTA
TGGAGGACGGCCGTCTGACAGACAGCCAGGGCAGAACGGTCAGCTTCAAAGATACCGTTTTGATTATGACTAGCAACGCT
GGAACCGGTGAAAAACAGGTGAAAGTCGGATTCCAATCTGAAGAGAGCGTCATGGAAGAACAAACGCTGATTGATTCACT
GAGCGCGTTCTTCAAACCGGAGTTTTTAAACCGGTTTGACAGCATTATTGAATTCCAATCCCTGAAAAAAGAACATCTCG
TGAAAATCGTCAGCCTGCTTCTCACAGAGCTTGAAGACACGTTAAAAGAGCGCGGCATCAGCCTGAGCGTCACCGATGAT
GCGAAAGAAAAAATAGCTGAAATCGGCTACCACCCCGCTTTCGGAGCACGCCCGCTCAGAAGAACCATCCAAGAATTGAT
CGAGGACGAAATGACAGATCTCTTATTGGATGATAACGAAATCAAAGCCTTCCATGTCGTAATGGAAGAGGACGGCATCA
AAGTCCGGGCACAATAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (608-679)

• ATPase family associated with various cellular activities (AAA) (AAA) (115-246)

• AAA domain (Cdc48 subfamily) (AAA_2) (436-602)

• AAA lid domain (AAA_lid_9) (252-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpE	Streptococcus mutans UA159	56.871	100	0.599
clpC	Lactococcus lactis subsp. cremoris KW2	56.676	100	0.596
clpE	Streptococcus pneumoniae Rx1	56.131	100	0.59
clpE	Streptococcus pneumoniae R6	56.131	100	0.59
clpE	Streptococcus pneumoniae D39	56.131	100	0.59
clpE	Streptococcus pneumoniae TIGR4	56.131	100	0.59
clpC	Bacillus subtilis subsp. subtilis str. 168	54.232	91.404	0.496
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	46.677	90.544	0.423
clpC	Streptococcus thermophilus LMD-9	44.154	93.123	0.411
clpC	Streptococcus thermophilus LMG 18311	43.846	93.123	0.408
clpC	Streptococcus pneumoniae Rx1	45.88	88.682	0.407
clpC	Streptococcus pneumoniae D39	45.88	88.682	0.407
clpC	Streptococcus pneumoniae TIGR4	45.88	88.682	0.407
clpC	Streptococcus mutans UA159	44.553	88.109	0.393
clpA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	41.026	89.398	0.367