Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   EB817_RS07005 Genome accession   NZ_CP033336
Coordinates   1366437..1367246 (-) Length   269 a.a.
NCBI ID   WP_129304870.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY165     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1361437..1372246
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EB817_RS06995 (EB817_07005) smc 1361773..1365312 (-) 3540 WP_129304869.1 chromosome segregation protein SMC -
  EB817_RS07000 (EB817_07010) rnc 1365313..1366005 (-) 693 WP_011284596.1 ribonuclease III -
  EB817_RS07005 (EB817_07015) vicX 1366437..1367246 (-) 810 WP_129304870.1 MBL fold metallo-hydrolase Regulator
  EB817_RS07010 (EB817_07020) vicK 1367250..1368602 (-) 1353 WP_030126091.1 cell wall metabolism sensor histidine kinase VicK Regulator
  EB817_RS07015 (EB817_07025) vicR 1368595..1369305 (-) 711 WP_002985645.1 response regulator YycF Regulator
  EB817_RS07020 (EB817_07030) - 1369467..1370501 (-) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  EB817_RS07025 (EB817_07035) - 1370557..1371804 (-) 1248 WP_011284594.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30122.23 Da        Isoelectric Point: 5.5314

>NTDB_id=323085 EB817_RS07005 WP_129304870.1 1366437..1367246(-) (vicX) [Streptococcus pyogenes strain TSPY165]
MNENGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=323085 EB817_RS07005 WP_129304870.1 1366437..1367246(-) (vicX) [Streptococcus pyogenes strain TSPY165]
ATGAATGAGAATGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment