Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   EB818_RS02350 Genome accession   NZ_CP033335
Coordinates   433137..433946 (+) Length   269 a.a.
NCBI ID   WP_129322617.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY208     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 428137..438946
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EB818_RS02330 (EB818_02340) - 428579..429826 (+) 1248 WP_129322615.1 AMP-binding protein -
  EB818_RS02335 (EB818_02345) - 429882..430916 (+) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  EB818_RS02340 (EB818_02350) vicR 431078..431788 (+) 711 WP_002985645.1 response regulator YycF Regulator
  EB818_RS02345 (EB818_02355) vicK 431781..433133 (+) 1353 WP_129322616.1 cell wall metabolism sensor histidine kinase VicK Regulator
  EB818_RS02350 (EB818_02360) vicX 433137..433946 (+) 810 WP_129322617.1 MBL fold metallo-hydrolase Regulator
  EB818_RS02355 (EB818_02365) rnc 434400..435092 (+) 693 WP_002985639.1 ribonuclease III -
  EB818_RS02360 (EB818_02370) smc 435093..438632 (+) 3540 WP_129322618.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30165.34 Da        Isoelectric Point: 5.7457

>NTDB_id=323016 EB818_RS02350 WP_129322617.1 433137..433946(+) (vicX) [Streptococcus pyogenes strain TSPY208]
MSEIGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDERNMLGKLDASQKHIFQRDKMLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=323016 EB818_RS02350 WP_129322617.1 433137..433946(+) (vicX) [Streptococcus pyogenes strain TSPY208]
ATGAGTGAAATTGGTTTTAAATACAGTATTTTGGCATCCGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
GCGATTATTAATTGACGCGGGGTTGACTGGTAAGAAAATCACCAGTCTCCTTGCTGAAATTGACCGCAAGCCTGAAGATT
TAGATGCTATTTTGATTACACATGAACATTCAGATCATATCAAGGGAGTGGGAGTGATGGCTCGCAAGTACCATTTGGAT
GTTTATGCCAACGAAAAAACATGGCAGTTGATGGATGAGCGTAATATGCTCGGGAAGCTTGATGCCTCCCAAAAACATAT
TTTCCAAAGAGATAAGATGTTAACCTTTGGAGATGTTGACATTGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.208

100

0.762

Multiple sequence alignment