Detailed information NTG0032297

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: SMI_RS05345
• Genome accession: NC_013853
• Coordinates: 1031115..1032185 (-)
• Length: 356 a.a.
• NCBI ID: WP_000817875.1
• Uniprot ID: -
• Organism: Streptococcus mitis B6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1026115..1037185

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMI_RS05315 (smi_1054)	-	1026318..1027010 (+)	693	WP_000120609.1	YjjG family noncanonical pyrimidine nucleotidase	-
SMI_RS05320 (smi_1055)	-	1027072..1027725 (+)	654	WP_000401337.1	uracil-DNA glycosylase	-
SMI_RS05325 (smi_1056)	mutX	1027735..1028199 (+)	465	WP_001135770.1	NUDIX hydrolase	Machinery gene
SMI_RS05330 (smi_1057)	-	1028212..1029480 (+)	1269	WP_000924530.1	dihydroorotase	-
SMI_RS05335 (smi_1058)	pdrM	1029521..1030873 (+)	1353	WP_000284947.1	sodium-coupled multidrug efflux MATE transporter PdrM	-
SMI_RS05340	-	1030961..1031041 (+)	81	Protein_1019	lipoate--protein ligase	-
SMI_RS05345 (smi_1059)	xerS	1031115..1032185 (-)	1071	WP_000817875.1	tyrosine recombinase XerS	Machinery gene
SMI_RS05350 (smi_1060)	-	1032466..1032903 (-)	438	WP_000696089.1	MepB family protein	-
SMI_RS05355 (smi_1061)	-	1032992..1034542 (-)	1551	WP_000392584.1	ClC family H(+)/Cl(-) exchange transporter	-
SMI_RS05360 (smi_1062)	-	1034559..1035338 (-)	780	WP_000201105.1	ribonuclease HII	-
SMI_RS05365 (smi_1063)	ylqF	1035325..1036176 (-)	852	WP_000201307.1	ribosome biogenesis GTPase YlqF	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41247.37 Da
• Isoelectric Point: 9.6571

>NTDB_id=32297 SMI_RS05345 WP_000817875.1 1031115..1032185(-) (xerS) [Streptococcus mitis B6]
MKREILLERIDKLKQIMPWYVLEYYQSKLAVPYSFTTLYEYLKEYYRFFSWVLESGISNADKMADIPLSVLENMSKKDME
SFILYLRERPLLNANTTKQGVSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETEGFLTYIDQEYPQQLSNRALSSFNKNKERDLAIIALLLASGVRLSEAVNLDLRDLNLKMMVIDVTRKGGKRDS
VNVAAFAKPYLENYLAIRNQRYKTEKTDTALFLTLYRGVPNRIDASSVEKMVAKYSEDFKVRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDSL

Nucleotide

• Length: 1071 bp

>NTDB_id=32297 SMI_RS05345 WP_000817875.1 1031115..1032185(-) (xerS) [Streptococcus mitis B6]
ATGAAACGTGAGATTTTACTGGAACGAATCGACAAACTAAAACAAATCATGCCCTGGTATGTTCTGGAATACTACCAATC
TAAGCTGGCTGTACCTTACAGTTTTACAACCTTGTACGAATACCTCAAGGAATACTATCGATTTTTTAGCTGGGTTTTGG
AGTCTGGCATTTCAAACGCAGATAAAATGGCTGATATTCCTTTATCTGTCTTGGAAAATATGTCTAAGAAAGACATGGAA
TCCTTTATCCTTTATCTACGAGAACGTCCTTTGCTGAATGCTAATACAACCAAGCAAGGAGTTTCTCAGACAACTATCAA
TCGGACTTTGTCAGCACTTTCTAGTCTTTATAAGTATTTGACTGAGGAAGTTGAAAACGATCAGGGCGAACCTTATTTTT
ATCGTAATGTAATGAAGAAAGTTTCAACAAAGAAAAAGAAAGAAACACTTGCTGCCAGAGCTGAAAACATCAAGCAAAAA
CTCTTTTTAGGTGATGAAACAGAAGGTTTTCTAACTTATATTGACCAAGAGTATCCACAACAACTTTCAAATCGCGCCCT
ATCTTCATTTAATAAAAATAAAGAACGTGATTTGGCCATTATCGCCCTTCTCTTGGCGTCTGGTGTCCGCTTATCTGAAG
CTGTTAATCTGGATCTAAGAGATCTCAACCTCAAAATGATGGTTATTGATGTTACTCGAAAAGGTGGCAAACGTGACTCT
GTCAATGTCGCTGCCTTTGCAAAACCTTATTTAGAAAATTATCTGGCCATTCGGAATCAACGCTATAAAACGGAAAAAAC
AGATACAGCTCTTTTTTTGACACTCTACAGAGGTGTTCCTAATCGTATCGATGCTTCCAGCGTTGAGAAAATGGTTGCTA
AGTACTCTGAGGACTTCAAAGTCCGTGTAACACCCCATAAACTACGACATACCCTAGCAACCAGGCTCTATGATGCCACT
AAATCGCAAGTTTTAGTCAGCCACCAACTAGGACACGCCAGTACACAAGTCACAGACCTCTATACTCATATCGTTAATGA
TGAACAAAAGAATGCTCTAGATAGTTTATAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (188-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_1) (68-123)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	98.596	100	0.986