Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | Aba7835_RS11035 | Genome accession | NZ_CP033243 |
| Coordinates | 2251540..2251920 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 7835 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2246540..2256920
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Aba7835_RS11005 (Aba7835_11135) | tadA | 2246658..2247161 (-) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
| Aba7835_RS11010 (Aba7835_11140) | - | 2247168..2248292 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| Aba7835_RS11015 (Aba7835_11145) | ung | 2248289..2249002 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| Aba7835_RS11020 (Aba7835_11150) | - | 2249053..2249649 (-) | 597 | WP_000908453.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| Aba7835_RS11025 (Aba7835_11155) | gspK | 2249880..2250839 (-) | 960 | WP_000301471.1 | type II secretion system minor pseudopilin GspK | - |
| Aba7835_RS11030 (Aba7835_11160) | xcpW | 2250839..2251540 (-) | 702 | WP_000594590.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| Aba7835_RS11035 (Aba7835_11165) | xcpV | 2251540..2251920 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| Aba7835_RS11040 (Aba7835_11170) | - | 2251910..2252464 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| Aba7835_RS11045 (Aba7835_11175) | - | 2252474..2253082 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| Aba7835_RS11050 (Aba7835_11180) | - | 2253120..2253893 (-) | 774 | WP_000497301.1 | TatD family hydrolase | - |
| Aba7835_RS11055 (Aba7835_11185) | - | 2253911..2254252 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| Aba7835_RS11060 (Aba7835_11190) | - | 2254264..2255244 (-) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| Aba7835_RS11065 (Aba7835_11195) | kdsB | 2255256..2256017 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=322819 Aba7835_RS11035 WP_000836911.1 2251540..2251920(-) (xcpV) [Acinetobacter baumannii strain 7835]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=322819 Aba7835_RS11035 WP_000836911.1 2251540..2251920(-) (xcpV) [Acinetobacter baumannii strain 7835]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |