Detailed information NTG0322818

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: Aba7835_RS11030
• Genome accession: NZ_CP033243
• Coordinates: 2250839..2251540 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594590.1
• Uniprot ID: A0A427R546
• Organism: Acinetobacter baumannii strain 7835
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2245839..2256540

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Aba7835_RS11000 (Aba7835_11130)	-	2246145..2246588 (-)	444	WP_001246674.1	SRPBCC family protein	-
Aba7835_RS11005 (Aba7835_11135)	tadA	2246658..2247161 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
Aba7835_RS11010 (Aba7835_11140)	-	2247168..2248292 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
Aba7835_RS11015 (Aba7835_11145)	ung	2248289..2249002 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
Aba7835_RS11020 (Aba7835_11150)	-	2249053..2249649 (-)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
Aba7835_RS11025 (Aba7835_11155)	gspK	2249880..2250839 (-)	960	WP_000301471.1	type II secretion system minor pseudopilin GspK	-
Aba7835_RS11030 (Aba7835_11160)	xcpW	2250839..2251540 (-)	702	WP_000594590.1	type II secretion system minor pseudopilin GspJ	Machinery gene
Aba7835_RS11035 (Aba7835_11165)	xcpV	2251540..2251920 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
Aba7835_RS11040 (Aba7835_11170)	-	2251910..2252464 (-)	555	WP_000841373.1	type II secretion system protein	-
Aba7835_RS11045 (Aba7835_11175)	-	2252474..2253082 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
Aba7835_RS11050 (Aba7835_11180)	-	2253120..2253893 (-)	774	WP_000497301.1	TatD family hydrolase	-
Aba7835_RS11055 (Aba7835_11185)	-	2253911..2254252 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
Aba7835_RS11060 (Aba7835_11190)	-	2254264..2255244 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
Aba7835_RS11065 (Aba7835_11195)	kdsB	2255256..2256017 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26627.52 Da
• Isoelectric Point: 9.3468

>NTDB_id=322818 Aba7835_RS11030 WP_000594590.1 2250839..2251540(-) (xcpW) [Acinetobacter baumannii strain 7835]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWTYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=322818 Aba7835_RS11030 WP_000594590.1 2250839..2251540(-) (xcpW) [Acinetobacter baumannii strain 7835]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGACTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A427R546

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991