Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   D9Y32_RS17245 Genome accession   NZ_CP033218
Coordinates   3346158..3346748 (-) Length   196 a.a.
NCBI ID   WP_003181328.1    Uniprot ID   A0A1Y0YEF8
Organism   Bacillus licheniformis strain TCCC 11148     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3341158..3351748
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9Y32_RS17220 (D9Y32_17240) mobB 3341388..3341915 (-) 528 WP_003181336.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  D9Y32_RS17225 (D9Y32_17245) glp 3341882..3343174 (-) 1293 WP_003181335.1 gephyrin-like molybdotransferase Glp -
  D9Y32_RS17230 (D9Y32_17250) - 3343194..3344207 (-) 1014 WP_011197943.1 molybdopterin-synthase adenylyltransferase MoeB -
  D9Y32_RS17235 (D9Y32_17255) - 3344313..3344900 (-) 588 WP_003181331.1 molybdenum cofactor guanylyltransferase -
  D9Y32_RS17240 (D9Y32_17260) - 3345053..3346011 (+) 959 Protein_3356 sporulation protein -
  D9Y32_RS17245 (D9Y32_17265) rok 3346158..3346748 (-) 591 WP_003181328.1 transcriptional regulator Rok Regulator
  D9Y32_RS17250 (D9Y32_17270) - 3347296..3347754 (-) 459 WP_003181327.1 redoxin domain-containing protein -
  D9Y32_RS17255 (D9Y32_17275) ahpA 3347836..3348378 (-) 543 WP_003181325.1 biofilm-specific peroxidase AhpA -
  D9Y32_RS17260 (D9Y32_17280) - 3348672..3348917 (-) 246 WP_003181323.1 YkuS family protein -
  D9Y32_RS17265 (D9Y32_17285) - 3348980..3350104 (-) 1125 WP_003181321.1 N-acetyldiaminopimelate deacetylase -
  D9Y32_RS17270 (D9Y32_17290) dapD 3350173..3350883 (-) 711 WP_003181319.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  D9Y32_RS17275 (D9Y32_17295) - 3350989..3351434 (-) 446 Protein_3363 flavodoxin -

Sequence

Protein


Download         Length: 196 a.a.        Molecular weight: 22665.62 Da        Isoelectric Point: 9.9960

>NTDB_id=322742 D9Y32_RS17245 WP_003181328.1 3346158..3346748(-) (rok) [Bacillus licheniformis strain TCCC 11148]
MFNEREALRLRLEQLNEAEVKVIREYQIERDNIYAKLRELDRPSSFNDTKKDFRPERKTESLPVLAELAAQEMKSYQQQQ
QQQPQASQKNQQQTSPQTSSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPN
MTTFMQSLIKMYPEVKKPYRGQYILEGEISTETEQQ

Nucleotide


Download         Length: 591 bp        

>NTDB_id=322742 D9Y32_RS17245 WP_003181328.1 3346158..3346748(-) (rok) [Bacillus licheniformis strain TCCC 11148]
ATGTTTAACGAGAGGGAAGCATTGCGTTTAAGATTAGAGCAGCTGAACGAGGCTGAAGTTAAGGTGATTAGGGAGTATCA
AATTGAGCGGGATAACATATATGCAAAGCTGCGTGAATTGGATCGTCCATCCAGCTTTAATGATACAAAAAAAGATTTTC
GCCCGGAGCGTAAAACTGAATCTCTCCCTGTTTTAGCTGAATTGGCTGCACAGGAGATGAAGAGCTACCAGCAACAGCAG
CAACAGCAGCCGCAAGCATCTCAAAAGAACCAGCAGCAGACTTCTCCGCAAACCTCCTCACTGCCTGCCGGAATTCCAGA
TGGAACGACAAGGCGCAGAAGGGGTACAGCACGTCCAGGCTCAAAAGCTGCAAAATTGCGTGAAGCGGCGATTAAAACAT
TAAAACGCCATAATGCGGCCATCAAAAGCTCCGAACTTCAAAAAGAAATCGAAAAAGAGAGCGGACTTGAGATCCCTAAT
ATGACAACCTTTATGCAAAGCCTGATTAAAATGTACCCGGAAGTCAAAAAACCATACCGCGGTCAATATATATTAGAGGG
TGAGATTTCTACTGAGACAGAGCAGCAATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Y0YEF8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

83.77

97.449

0.816

Multiple sequence alignment