Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   D2B33_RS13820 Genome accession   NZ_CP033198
Coordinates   2714964..2715149 (-) Length   61 a.a.
NCBI ID   WP_011197761.1    Uniprot ID   A0A6I7TNH1
Organism   Bacillus paralicheniformis strain FA6     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2709964..2720149
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D2B33_RS13795 (D2B33_13980) - 2710263..2711237 (-) 975 WP_003180594.1 ABC transporter ATP-binding protein -
  D2B33_RS13800 (D2B33_13985) - 2711429..2712217 (-) 789 WP_020450929.1 DUF2268 domain-containing protein -
  D2B33_RS13805 (D2B33_13990) fabF 2712303..2713541 (-) 1239 WP_003180590.1 beta-ketoacyl-ACP synthase II -
  D2B33_RS13810 (D2B33_13995) - 2713563..2714501 (-) 939 WP_003180588.1 beta-ketoacyl-ACP synthase III -
  D2B33_RS13815 (D2B33_14000) - 2714669..2714911 (+) 243 WP_020450928.1 hypothetical protein -
  D2B33_RS13820 (D2B33_14005) comZ 2714964..2715149 (-) 186 WP_011197761.1 ComZ family protein Regulator
  D2B33_RS13825 (D2B33_14010) med 2715160..2716113 (-) 954 WP_020450927.1 BMP family ABC transporter substrate-binding protein Regulator
  D2B33_RS13830 (D2B33_14015) - 2716198..2716773 (-) 576 WP_003180580.1 hypothetical protein -
  D2B33_RS13835 (D2B33_14020) - 2716860..2717594 (-) 735 WP_020450926.1 hypothetical protein -
  D2B33_RS13840 (D2B33_14025) - 2717826..2718020 (+) 195 WP_009328851.1 YjzD family protein -
  D2B33_RS13845 (D2B33_14030) - 2718084..2718263 (-) 180 WP_003180573.1 YjzC family protein -
  D2B33_RS13850 (D2B33_14035) - 2718445..2719257 (+) 813 WP_020450925.1 undecaprenyl-diphosphate phosphatase -

Sequence

Protein


Download         Length: 61 a.a.        Molecular weight: 6842.96 Da        Isoelectric Point: 4.2564

>NTDB_id=322459 D2B33_RS13820 WP_011197761.1 2714964..2715149(-) (comZ) [Bacillus paralicheniformis strain FA6]
MHEKSMEFLQIAMKYVPEAKAEMEKAGIELSPEMLEPFMNLFTKVMAEAYELGKAEAGSDA

Nucleotide


Download         Length: 186 bp        

>NTDB_id=322459 D2B33_RS13820 WP_011197761.1 2714964..2715149(-) (comZ) [Bacillus paralicheniformis strain FA6]
ATGCACGAAAAATCAATGGAATTTTTGCAAATTGCCATGAAATACGTTCCGGAAGCGAAAGCAGAGATGGAAAAAGCGGG
AATCGAACTTTCCCCGGAAATGCTTGAGCCATTCATGAACTTGTTTACGAAAGTGATGGCCGAGGCTTACGAGCTCGGTA
AAGCGGAAGCTGGTTCAGACGCCTGA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I7TNH1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

73.333

98.361

0.721

Multiple sequence alignment