Detailed information NTG0322460

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: D2B33_RS13825
• Genome accession: NZ_CP033198
• Coordinates: 2715160..2716113 (-)
• Length: 317 a.a.
• NCBI ID: WP_020450927.1
• Uniprot ID: A0A6N2FML9
• Organism: Bacillus paralicheniformis strain FA6
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 2710160..2721113

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D2B33_RS13795 (D2B33_13980)	-	2710263..2711237 (-)	975	WP_003180594.1	ABC transporter ATP-binding protein	-
D2B33_RS13800 (D2B33_13985)	-	2711429..2712217 (-)	789	WP_020450929.1	DUF2268 domain-containing protein	-
D2B33_RS13805 (D2B33_13990)	fabF	2712303..2713541 (-)	1239	WP_003180590.1	beta-ketoacyl-ACP synthase II	-
D2B33_RS13810 (D2B33_13995)	-	2713563..2714501 (-)	939	WP_003180588.1	beta-ketoacyl-ACP synthase III	-
D2B33_RS13815 (D2B33_14000)	-	2714669..2714911 (+)	243	WP_020450928.1	hypothetical protein	-
D2B33_RS13820 (D2B33_14005)	comZ	2714964..2715149 (-)	186	WP_011197761.1	ComZ family protein	Regulator
D2B33_RS13825 (D2B33_14010)	med	2715160..2716113 (-)	954	WP_020450927.1	BMP family ABC transporter substrate-binding protein	Regulator
D2B33_RS13830 (D2B33_14015)	-	2716198..2716773 (-)	576	WP_003180580.1	hypothetical protein	-
D2B33_RS13835 (D2B33_14020)	-	2716860..2717594 (-)	735	WP_020450926.1	hypothetical protein	-
D2B33_RS13840 (D2B33_14025)	-	2717826..2718020 (+)	195	WP_009328851.1	YjzD family protein	-
D2B33_RS13845 (D2B33_14030)	-	2718084..2718263 (-)	180	WP_003180573.1	YjzC family protein	-
D2B33_RS13850 (D2B33_14035)	-	2718445..2719257 (+)	813	WP_020450925.1	undecaprenyl-diphosphate phosphatase	-
D2B33_RS13855 (D2B33_14040)	argF	2719295..2720245 (-)	951	WP_020450924.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35390.09 Da
• Isoelectric Point: 4.7166

>NTDB_id=322460 D2B33_RS13825 WP_020450927.1 2715160..2716113(-) (med) [Bacillus paralicheniformis strain FA6]
MVYRLVAIFFILLALSGCGQSPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLRIQSVYNVDVYYKEGIDNDAAIKMAVED
FHKKGVNLIYGHGSEYEKAFNEICKDYPDIHFVLMNSKADHPNVTSISLEGEAMGFFGGMTAAHQSKTKKIGVLATYKWQ
PEVEGFSEGAKYLDPDIEVMTEYVGQWDDSENAVKLYEKMKKAGADVVYPAGDGYNVPVIEQIKKDGLYAIGYVSDQSEL
GENVVLTSTIQHVDDAYELTADEFNKGTLKGGKRSFDIQDGVIEMGEFSPVVDQSFQEKMNRLIDEYKKTNKLPNEH

Nucleotide

• Length: 954 bp

>NTDB_id=322460 D2B33_RS13825 WP_020450927.1 2715160..2716113(-) (med) [Bacillus paralicheniformis strain FA6]
ATGGTGTACAGGCTTGTCGCGATTTTTTTCATTCTCCTGGCGCTAAGCGGCTGCGGACAATCGCCGCTGAAAGGGAAAAT
TGAAAAAGTCGGTTTGCTTGTCCCTGATACGATAAATGACCAAGTATGGGGAACCAAAGGATATAAAGGATTATTAAGAA
TACAATCCGTCTACAATGTCGACGTCTATTATAAAGAGGGAATCGATAATGACGCTGCCATTAAAATGGCTGTAGAAGAT
TTTCACAAAAAAGGCGTCAACCTCATCTACGGGCACGGAAGCGAATATGAAAAAGCCTTTAATGAGATATGCAAAGATTA
TCCTGATATTCATTTTGTTTTAATGAACTCGAAAGCCGATCACCCAAATGTGACAAGCATATCGCTTGAAGGAGAAGCGA
TGGGGTTCTTCGGCGGAATGACGGCGGCCCATCAGTCAAAAACAAAGAAAATCGGCGTGCTCGCAACGTATAAATGGCAG
CCTGAAGTAGAAGGATTTTCCGAAGGGGCTAAATACCTCGATCCGGACATTGAGGTGATGACAGAATATGTCGGCCAGTG
GGACGACAGCGAAAATGCCGTCAAACTGTATGAAAAAATGAAGAAGGCAGGCGCGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTCCCTGTCATTGAACAAATCAAAAAGGACGGGCTGTACGCTATCGGCTATGTAAGCGACCAGTCGGAATTG
GGTGAGAATGTCGTTTTGACAAGCACCATACAGCATGTAGACGACGCTTATGAACTCACCGCCGACGAGTTTAATAAAGG
AACGCTTAAAGGCGGCAAGCGCTCATTTGACATTCAAGACGGCGTCATCGAAATGGGAGAATTCAGCCCTGTTGTCGATC
AGTCATTTCAAGAAAAGATGAATCGGCTGATTGACGAATACAAAAAAACAAACAAACTGCCAAACGAACATTGA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-314)

3D structure

• AlphaFold DB: A0A6N2FML9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	68.153	99.054	0.675