Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   FC605_RS09655 Genome accession   NZ_CP040528
Coordinates   1909418..1911421 (+) Length   667 a.a.
NCBI ID   WP_069703551.1    Uniprot ID   -
Organism   Bacillus subtilis strain PR10     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1904418..1916421
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FC605_RS09615 (FC605_09615) pghL 1904781..1905539 (+) 759 WP_080529365.1 gamma-polyglutamate hydrolase PghL -
  FC605_RS09620 (FC605_09620) - 1905566..1906015 (-) 450 WP_003245454.1 YndM family protein -
  FC605_RS09625 (FC605_09625) fosM 1906223..1906657 (+) 435 WP_032725818.1 FosM family fosfomycin resistance protein -
  FC605_RS21290 - 1906566..1906843 (+) 278 Protein_1834 hypothetical protein -
  FC605_RS09635 (FC605_09635) dinR/lexA 1907196..1907813 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  FC605_RS09640 (FC605_09640) yneA 1907963..1908280 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  FC605_RS09645 (FC605_09645) dinL 1908299..1908952 (+) 654 WP_015714011.1 recombinase family protein -
  FC605_RS09650 (FC605_09650) ynzC 1909016..1909249 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  FC605_RS09655 (FC605_09655) recP/tkt 1909418..1911421 (+) 2004 WP_069703551.1 transketolase Machinery gene
  FC605_RS09660 (FC605_09660) sirA 1911574..1912020 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  FC605_RS09665 (FC605_09665) yneF 1912106..1912324 (+) 219 WP_003221221.1 YneF family protein -
  FC605_RS09670 (FC605_09670) ynzD 1912398..1912571 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  FC605_RS09675 (FC605_09675) ccdA 1912791..1913498 (+) 708 WP_003231585.1 cytochrome c-type biogenesis protein CcdA -
  FC605_RS09680 (FC605_09680) yneI 1913587..1913949 (+) 363 WP_003245707.1 response regulator -
  FC605_RS09685 (FC605_09685) yneJ 1914028..1914519 (+) 492 WP_010886519.1 CcdC family protein -
  FC605_RS09690 (FC605_09690) yneK 1914550..1914978 (-) 429 WP_003231580.1 DynA interaction protein YneK -
  FC605_RS09695 (FC605_09695) cotM 1915212..1915604 (-) 393 WP_015251997.1 outer spore coat protein CotM -
  FC605_RS09700 (FC605_09700) sspP 1915685..1915831 (-) 147 WP_003221237.1 small acid-soluble spore protein P -
  FC605_RS09705 (FC605_09705) sspO 1915863..1916009 (-) 147 WP_003244839.1 acid-soluble spore protein SspO -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72284.39 Da        Isoelectric Point: 4.7291

>NTDB_id=321918 FC605_RS09655 WP_069703551.1 1909418..1911421(+) (recP/tkt) [Bacillus subtilis strain PR10]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFVLSAGHGSALLYSMLHLSG
FDLSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLQLGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIEELTAAIEKARQNEKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAAAVKESGEKKEQEWNAQFAKYKE
VYPELAEQLELAIKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGLAKKIPFFVGGSADLAGSNKTTIKNAGDFTAVDY
AGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRAMPNLSLIRPADGNETAAAWKLAVQSTDHPTALVLTRQNLPTIDQTAEEALAGVEKGAYVVSKSKNETPDALLIASG
SEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNEVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGAS
APGETIINEYGFSVPNVVNRVKALINK

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=321918 FC605_RS09655 WP_069703551.1 1909418..1911421(+) (recP/tkt) [Bacillus subtilis strain PR10]
ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAATAGACGCTATTGAAAAAGCAAATTCTGGTCA
CCCAGGGATGCCGATGGGAGCCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCGGCAAACCCTG
GCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGACACGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGG
TTTGATCTTAGTATTGAAGATCTTAAGGGATTCCGCCAGTGGGGCAGCAAAACACCAGGACATCCGGAATTCGGACATAC
TGCCGGTGTTGATGCTACAACAGGTCCGCTTGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATTGCTGAACGCCATT
TAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCATTATACATACAGTATTTGCGGTGATGGTGATTTAATG
GAAGGTATTTCTTCTGAAGCCGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATCGTACTATACGATTCTAATGA
CATCTCTCTTGATGGAGACCTCGACCGTTCATTCTCTGAAAACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTC
TTTATGTTGAGGATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAAGCACGCCAAAATGAAAAGAAACCTACA
TTAATTGAAGTGAAAACGACAATCGGATTCGGTTCACCTAACCGTGCCGGTACATCCGGTGTTCACGGTGCGCCGCTTGG
TAAAGAGGAAAGCAAATTAACAAAAGAAGCTTACGCGTGGACATATGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATG
AGCATTTCGCTGCAGCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAATGCTCAATTCGCTAAATATAAAGAA
GTTTATCCTGAACTTGCTGAACAGCTTGAACTGGCAATCAAAGGAGAGCTTCCGAAGGACTGGGATCAAGAGGTTCCTGT
GTATGAAAAAGGAAGCAGCCTGGCATCCCGTGCATCTTCCGGTGAAGTTCTCAACGGACTTGCGAAAAAAATTCCTTTCT
TTGTCGGAGGTTCTGCTGACCTAGCGGGATCGAACAAAACGACTATTAAAAATGCCGGTGATTTTACAGCGGTTGATTAC
GCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATTTGCGATGGGTGCAGCCTTAAACGGTATGGCGCTTCATGGCGGTCT
TCGTGTATTCGGCGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATTCGCCTTGCAGCGTTAATGGGCCTTC
CTGTGACATATGTCTTCACACATGACAGTATTGCGGTTGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGCTTGCT
TCACTCCGTGCGATGCCTAACCTTTCTTTGATCCGTCCAGCAGACGGCAATGAGACAGCAGCAGCATGGAAGCTTGCAGT
GCAAAGCACTGACCACCCAACAGCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAACAGCTGAAGAAGCAT
TGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCTAAATCTAAAAACGAAACACCTGACGCTCTTCTCATTGCCTCCGGG
TCCGAGGTAGGTCTTGCAATTGAAGCGCAGGCTGAATTGGCAAAAGAAAATATCGATGTTTCTGTTGTCAGCATGCCTTC
AATGGACCGTTTTGAGAAACAATCTGATGAATACAAAAACGAAGTCCTTCCTGCAGATGTGAAAAAACGTCTTGCAATTG
AAATGGGCTCATCATTTGGATGGGGCAAATACACGGGGCTTGAAGGTGACGTTCTCGGCATAGACCGATTCGGTGCATCT
GCTCCTGGTGAAACCATCATTAACGAATACGGCTTCTCAGTTCCGAACGTAGTGAATCGAGTTAAGGCATTAATCAATAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

56.647

99.25

0.562


Multiple sequence alignment