Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   FC605_RS09635 Genome accession   NZ_CP040528
Coordinates   1907196..1907813 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain PR10     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1902196..1912813
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FC605_RS09605 (FC605_09605) yndJ 1902524..1904164 (+) 1641 WP_069703552.1 YndJ family protein -
  FC605_RS09610 (FC605_09610) - 1904242..1904556 (+) 315 WP_003245621.1 hypothetical protein -
  FC605_RS09615 (FC605_09615) pghL 1904781..1905539 (+) 759 WP_080529365.1 gamma-polyglutamate hydrolase PghL -
  FC605_RS09620 (FC605_09620) - 1905566..1906015 (-) 450 WP_003245454.1 YndM family protein -
  FC605_RS09625 (FC605_09625) fosM 1906223..1906657 (+) 435 WP_032725818.1 FosM family fosfomycin resistance protein -
  FC605_RS21290 - 1906566..1906843 (+) 278 Protein_1834 hypothetical protein -
  FC605_RS09635 (FC605_09635) dinR/lexA 1907196..1907813 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  FC605_RS09640 (FC605_09640) yneA 1907963..1908280 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  FC605_RS09645 (FC605_09645) dinL 1908299..1908952 (+) 654 WP_015714011.1 recombinase family protein -
  FC605_RS09650 (FC605_09650) ynzC 1909016..1909249 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  FC605_RS09655 (FC605_09655) recP/tkt 1909418..1911421 (+) 2004 WP_069703551.1 transketolase Machinery gene
  FC605_RS09660 (FC605_09660) sirA 1911574..1912020 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  FC605_RS09665 (FC605_09665) yneF 1912106..1912324 (+) 219 WP_003221221.1 YneF family protein -
  FC605_RS09670 (FC605_09670) ynzD 1912398..1912571 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=321917 FC605_RS09635 WP_003238209.1 1907196..1907813(-) (dinR/lexA) [Bacillus subtilis strain PR10]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=321917 FC605_RS09635 WP_003238209.1 1907196..1907813(-) (dinR/lexA) [Bacillus subtilis strain PR10]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGTTTGGAAACAAAAG
GGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACTGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment