Detailed information    

insolico Bioinformatically predicted

Overview

Name   hexB   Type   Machinery gene
Locus tag   FC605_RS09165 Genome accession   NZ_CP040528
Coordinates   1755380..1757263 (+) Length   627 a.a.
NCBI ID   WP_080529329.1    Uniprot ID   -
Organism   Bacillus subtilis strain PR10     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1750380..1762263
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FC605_RS09150 (FC605_09150) ymcA 1751425..1751856 (+) 432 WP_003231834.1 regulatory iron-sulfur-containing complex subunit RicA Regulator
  FC605_RS09155 (FC605_09155) cotE 1752110..1752655 (+) 546 WP_003231833.1 outer spore coat protein CotE -
  FC605_RS09160 (FC605_09160) hexA 1752788..1755364 (+) 2577 WP_076457703.1 DNA mismatch repair protein MutS Machinery gene
  FC605_RS09165 (FC605_09165) hexB 1755380..1757263 (+) 1884 WP_080529329.1 DNA mismatch repair endonuclease MutL Machinery gene
  FC605_RS09170 (FC605_09170) ymzD 1757664..1758119 (-) 456 WP_080529330.1 regulatory YrvL family protein -
  FC605_RS09175 (FC605_09175) - 1758247..1758804 (-) 558 WP_003245720.1 hypothetical protein -
  FC605_RS09180 (FC605_09180) pksA 1758925..1759542 (+) 618 WP_080529331.1 TetR/AcrR family transcriptional regulator -
  FC605_RS09185 (FC605_09185) pksB 1759732..1760409 (+) 678 WP_080529332.1 MBL fold metallo-hydrolase -
  FC605_RS09190 (FC605_09190) - 1760519..1760785 (+) 267 WP_138322644.1 hypothetical protein -
  FC605_RS09195 (FC605_09195) fabD 1760782..1761648 (+) 867 WP_080529333.1 ACP S-malonyltransferase -

Sequence

Protein


Download         Length: 627 a.a.        Molecular weight: 70514.38 Da        Isoelectric Point: 5.6008

>NTDB_id=321916 FC605_RS09165 WP_080529329.1 1755380..1757263(+) (hexB) [Bacillus subtilis strain PR10]
MAKVIQLSDELSNKIAAGEVVERPASVVKELVENAIDADSTVIEIDIEEAGLASIRVLDNGEGMENEDCKRAFRRHATSK
IKDENDLFRVRTLGFRGEALPSIASVSHLEITTSTGEGAGTKLVLQGGNIISESRSSSRKGTEIVVSNLFFNTPARLKYM
KTVHTELGNITDVVNRIALAHPEVSIRLRHHGKNLLQTNGNGDVRHVLAAIYGTAVAKKMLPLHVSSLDFEVKGYIALPE
ITRASRNYMSSVVNGRYIKNFPLVKAVHEGYHTLLPIGRHPITFIEITMDPILVDVNVHPSKLEVRLSKETELHDLIRDG
IKDVFKQQQLIPSAQLPKKSAPAIKNEQQFITFDEKPPEKKVSEKSTASSYSPMKLSSVVKEPVDAEEELPPLQFDAPPI
VDQEQTLEVSDISEELPETFEQECHEEQQQPASERVPIMYPIGQMHGTYILAQNENGLYIIDQHAAQERIKYEYFREKVG
EVEPEVQDMIVPLTFHYSTNEALIIEQHKQELESVGVFLESFGSNSYIVRCHPAWFPKGEEAELIEEIIQQVLDSKNIDI
KKLREEAAIMMSCKGSIKANRHLRNDEIKALLDDLRSTSDPFTCPHGRPIIIHHSTYEMEKMFKRVM

Nucleotide


Download         Length: 1884 bp        

>NTDB_id=321916 FC605_RS09165 WP_080529329.1 1755380..1757263(+) (hexB) [Bacillus subtilis strain PR10]
GTGGCAAAAGTCATCCAGCTGTCAGATGAGCTTTCAAATAAAATAGCGGCGGGCGAGGTTGTGGAACGGCCCGCCTCAGT
CGTCAAAGAATTGGTGGAAAATGCGATCGACGCTGACAGCACAGTCATTGAAATCGATATTGAGGAAGCAGGCCTTGCAT
CCATTCGGGTCTTGGATAACGGCGAAGGAATGGAGAATGAAGATTGCAAACGTGCTTTCCGCCGCCACGCAACGAGTAAA
ATAAAAGATGAAAATGATTTATTCAGGGTGAGAACGCTCGGTTTCAGGGGAGAAGCCCTGCCGAGTATCGCGTCAGTCTC
TCATCTGGAGATTACAACAAGCACTGGTGAAGGAGCTGGGACGAAGCTCGTCCTCCAAGGAGGAAACATCATTTCCGAAT
CGCGTTCCTCAAGCAGGAAGGGAACTGAAATTGTCGTTTCCAACCTGTTTTTTAACACACCGGCCCGTTTGAAATATATG
AAAACCGTTCATACAGAGCTTGGAAACATTACGGATGTGGTTAACCGTATTGCTCTTGCGCATCCAGAGGTATCGATTCG
CCTGCGCCATCATGGGAAAAACCTGCTTCAAACGAACGGAAATGGAGATGTGCGCCATGTACTGGCAGCGATTTACGGCA
CGGCTGTCGCCAAAAAAATGCTTCCGCTGCATGTGAGCTCTTTGGATTTTGAAGTAAAGGGATATATCGCCCTCCCAGAG
ATTACACGGGCGTCGAGAAACTATATGTCGTCTGTGGTGAATGGCCGTTACATTAAAAATTTCCCGCTCGTCAAAGCGGT
TCATGAAGGCTATCATACGCTTCTGCCGATCGGACGCCATCCAATTACCTTTATAGAAATTACGATGGACCCGATTTTAG
TCGATGTCAACGTGCATCCATCGAAGCTTGAGGTCCGGCTCAGCAAGGAAACAGAGCTTCATGACTTAATACGTGACGGA
ATTAAAGATGTGTTTAAACAGCAGCAGCTGATTCCGAGTGCCCAGCTCCCGAAAAAATCAGCACCTGCCATCAAAAATGA
GCAGCAGTTCATAACCTTTGATGAAAAGCCTCCGGAAAAAAAAGTTTCGGAAAAATCGACTGCGTCATCTTATTCACCAA
TGAAGCTCAGCTCAGTCGTGAAAGAGCCGGTTGATGCGGAGGAAGAATTGCCTCCTCTCCAATTTGATGCTCCACCTATC
GTTGATCAGGAACAAACCCTTGAGGTGTCCGATATTTCAGAAGAACTGCCTGAAACATTTGAGCAGGAATGCCATGAGGA
ACAGCAGCAGCCAGCGTCTGAGCGGGTTCCGATTATGTACCCGATCGGCCAGATGCACGGGACTTATATATTGGCACAAA
ACGAAAACGGCCTGTATATTATCGACCAGCACGCCGCCCAAGAACGTATTAAATATGAGTACTTTCGTGAAAAGGTGGGG
GAGGTTGAGCCTGAGGTGCAAGATATGATTGTACCGCTGACGTTCCACTACTCCACAAATGAGGCTTTGATTATTGAACA
GCACAAACAAGAGCTCGAAAGCGTCGGTGTCTTTTTAGAGTCATTCGGCTCTAACAGTTACATCGTCCGCTGCCACCCGG
CCTGGTTTCCAAAGGGAGAAGAAGCAGAGCTCATAGAAGAAATCATTCAGCAGGTGCTCGACTCCAAAAATATAGATATT
AAAAAACTTCGCGAGGAAGCGGCGATTATGATGAGCTGCAAAGGCTCCATCAAAGCAAATCGCCACCTCAGAAACGACGA
AATCAAAGCGCTTCTGGACGACCTCCGAAGCACATCAGACCCATTTACATGCCCGCACGGCCGCCCGATCATCATACACC
ATTCCACTTATGAGATGGAAAAGATGTTCAAACGCGTGATGTAG

Domains

Predicted by InterProScan.

DNA mismatch repair protein, C-terminal domain (DNA_mis_repair)

(209-324)

MutL C terminal dimerisation domain (MutL_C)

(442-583)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c_3)

(25-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hexB Streptococcus pneumoniae R6

45.356

100

0.467

Multiple sequence alignment