Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | GALLO_RS03555 | Genome accession | NC_013798 |
| Coordinates | 672692..673288 (+) | Length | 198 a.a. |
| NCBI ID | WP_012961653.1 | Uniprot ID | F5X5E6 |
| Organism | Streptococcus gallolyticus UCN34 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 667692..678288
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GALLO_RS03535 (GALLO_0645) | - | 668240..668806 (-) | 567 | WP_012961649.1 | DUF3267 domain-containing protein | - |
| GALLO_RS03540 (GALLO_0646) | - | 669055..669576 (+) | 522 | WP_012961650.1 | transcription repressor NadR | - |
| GALLO_RS03545 (GALLO_0647) | - | 669773..670327 (+) | 555 | WP_012961651.1 | hypothetical protein | - |
| GALLO_RS03550 (GALLO_0648) | pbp2b | 670482..672623 (+) | 2142 | WP_012961652.1 | penicillin-binding protein PBP2B | - |
| GALLO_RS03555 (GALLO_0649) | recR | 672692..673288 (+) | 597 | WP_012961653.1 | recombination mediator RecR | Machinery gene |
| GALLO_RS03560 (GALLO_0650) | - | 673527..674573 (+) | 1047 | WP_012961654.1 | D-alanine--D-alanine ligase | - |
| GALLO_RS03565 (GALLO_0651) | - | 674678..675238 (-) | 561 | WP_012961655.1 | folate family ECF transporter S component | - |
| GALLO_RS03570 (GALLO_0652) | - | 675482..676846 (+) | 1365 | WP_012961656.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| GALLO_RS03575 (GALLO_0653) | - | 676859..678013 (+) | 1155 | WP_012961657.1 | polymerase | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21726.89 Da Isoelectric Point: 4.5286
>NTDB_id=32174 GALLO_RS03555 WP_012961653.1 672692..673288(+) (recR) [Streptococcus gallolyticus UCN34]
MLYPTPIAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCGNLTDEDPCNICTDETRDRS
VILVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGVGPDDINLKSLITRLMDSEVNEVIIATNATADGEATSMYISRVL
KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
MLYPTPIAKLIDSFTKLPGIGIKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCGNLTDEDPCNICTDETRDRS
VILVVEDSKDVSAMEKIQEYHGLYHVLHGLISPMNGVGPDDINLKSLITRLMDSEVNEVIIATNATADGEATSMYISRVL
KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
Nucleotide
Download Length: 597 bp
>NTDB_id=32174 GALLO_RS03555 WP_012961653.1 672692..673288(+) (recR) [Streptococcus gallolyticus UCN34]
ATGCTTTATCCAACACCTATCGCAAAGCTGATTGATAGTTTTACAAAATTACCAGGAATTGGTATAAAAACAGCAACACG
TTTGGCTTTCTACACGATTGGAATGTCAGATGAAGATGTGAATGAATTCGCCAAAAATTTATTGGCAGCTAAGCGTGAAT
TGACTTATTGTTCTGTTTGTGGGAATTTAACAGATGAAGACCCTTGTAATATCTGTACAGATGAAACTCGTGACCGTTCC
GTTATTTTAGTGGTTGAAGATTCAAAAGACGTATCTGCCATGGAAAAAATTCAAGAGTATCATGGCTTGTACCATGTCTT
GCATGGCTTGATTTCACCAATGAACGGTGTCGGACCAGATGATATTAATTTGAAATCATTAATTACACGTTTAATGGATA
GTGAGGTCAACGAAGTGATTATTGCAACCAATGCAACCGCAGACGGTGAAGCAACTTCTATGTATATCTCACGTGTCCTA
AAACCAGCAGGAATCAAGGTAACACGTTTAGCACGTGGACTGGCTGTCGGCTCAGACATCGAATATGCCGACGAAGTCAC
CCTACTTCGTGCCATAGAAAACCGAACAGAATTGTAG
ATGCTTTATCCAACACCTATCGCAAAGCTGATTGATAGTTTTACAAAATTACCAGGAATTGGTATAAAAACAGCAACACG
TTTGGCTTTCTACACGATTGGAATGTCAGATGAAGATGTGAATGAATTCGCCAAAAATTTATTGGCAGCTAAGCGTGAAT
TGACTTATTGTTCTGTTTGTGGGAATTTAACAGATGAAGACCCTTGTAATATCTGTACAGATGAAACTCGTGACCGTTCC
GTTATTTTAGTGGTTGAAGATTCAAAAGACGTATCTGCCATGGAAAAAATTCAAGAGTATCATGGCTTGTACCATGTCTT
GCATGGCTTGATTTCACCAATGAACGGTGTCGGACCAGATGATATTAATTTGAAATCATTAATTACACGTTTAATGGATA
GTGAGGTCAACGAAGTGATTATTGCAACCAATGCAACCGCAGACGGTGAAGCAACTTCTATGTATATCTCACGTGTCCTA
AAACCAGCAGGAATCAAGGTAACACGTTTAGCACGTGGACTGGCTGTCGGCTCAGACATCGAATATGCCGACGAAGTCAC
CCTACTTCGTGCCATAGAAAACCGAACAGAATTGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Streptococcus pneumoniae R6 |
87.374 |
100 |
0.874 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
65.152 |
100 |
0.652 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.205 |
98.485 |
0.475 |