Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   EAO82_RS03010 Genome accession   NZ_CP033116
Coordinates   642879..643292 (+) Length   137 a.a.
NCBI ID   WP_096346598.1    Uniprot ID   A0AA91U257
Organism   Halopseudomonas pelagia strain Kongs-67     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 637879..648292
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EAO82_RS02980 (EAO82_02980) - 638024..639067 (-) 1044 WP_096346593.1 aspartate carbamoyltransferase catalytic subunit -
  EAO82_RS02985 (EAO82_02985) pyrR 639075..639587 (-) 513 WP_096346594.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  EAO82_RS02990 (EAO82_02990) ruvX 639584..640018 (-) 435 WP_096346595.1 Holliday junction resolvase RuvX -
  EAO82_RS02995 (EAO82_02995) - 640018..640587 (-) 570 WP_096346660.1 YqgE/AlgH family protein -
  EAO82_RS03000 (EAO82_03000) - 640647..641555 (-) 909 WP_096346596.1 energy transducer TonB -
  EAO82_RS03005 (EAO82_03005) gshB 641621..642583 (-) 963 WP_096346597.1 glutathione synthase -
  EAO82_RS03010 (EAO82_03010) pilG 642879..643292 (+) 414 WP_096346598.1 PleD family two-component system response regulator Regulator
  EAO82_RS03015 (EAO82_03015) pilH 643330..643695 (+) 366 WP_096346599.1 twitching motility response regulator PilH -
  EAO82_RS03020 (EAO82_03020) - 643742..644281 (+) 540 WP_096346661.1 chemotaxis protein CheW -
  EAO82_RS03025 (EAO82_03025) - 644371..646407 (+) 2037 WP_096346662.1 methyl-accepting chemotaxis protein -
  EAO82_RS03030 (EAO82_03030) - 646467..647363 (+) 897 WP_410402932.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 137 a.a.        Molecular weight: 14913.21 Da        Isoelectric Point: 6.2282

>NTDB_id=321612 EAO82_RS03010 WP_096346598.1 642879..643292(+) (pilG) [Halopseudomonas pelagia strain Kongs-67]
MEENFESLKVMVIDDSKTIRRTAETLLKKVGCTVITAVDGFDALAKIADHHPDIIFVDIMMPRLDGYQTCALIKNNSAFR
GTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIRAHVPQSDDLAGASGA

Nucleotide


Download         Length: 414 bp        

>NTDB_id=321612 EAO82_RS03010 WP_096346598.1 642879..643292(+) (pilG) [Halopseudomonas pelagia strain Kongs-67]
ATGGAAGAAAATTTCGAAAGCCTGAAAGTCATGGTCATTGACGACAGCAAGACCATCCGCCGTACAGCAGAAACCCTGCT
GAAAAAGGTCGGATGTACAGTGATCACCGCCGTCGATGGTTTCGATGCGCTGGCCAAGATCGCTGACCACCACCCCGATA
TTATCTTTGTTGACATCATGATGCCGCGTCTTGATGGCTATCAGACCTGTGCGCTGATAAAAAACAACAGCGCCTTCCGG
GGTACCCCGGTGATCATGCTGTCCAGCAAGGACGGGCTGTTTGATAAAGCCAAGGGGCGCATTGTTGGTTCAGATCAATA
CCTGACCAAACCCTTCAGCAAGGAAGAGCTGCTGGGCGCGATTCGTGCCCATGTTCCACAATCCGATGATTTAGCGGGTG
CATCCGGCGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.4

91.241

0.715
  vicR Streptococcus mutans UA159

41.27

91.971

0.38

Multiple sequence alignment