Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   GALLO_RS02080 Genome accession   NC_013798
Coordinates   388328..389362 (+) Length   344 a.a.
NCBI ID   WP_009853438.1    Uniprot ID   A0A060RH76
Organism   Streptococcus gallolyticus UCN34     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 383328..394362
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GALLO_RS02050 (GALLO_0355) tsaE 384585..385028 (+) 444 WP_009853432.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  GALLO_RS02055 (GALLO_0356) - 385021..385533 (+) 513 WP_009853433.1 GNAT family N-acetyltransferase -
  GALLO_RS02060 (GALLO_0357) brpA 385544..386701 (+) 1158 WP_009853434.1 biofilm formation/cell division transcriptional regulator BrpA -
  GALLO_RS02065 (GALLO_0358) - 386819..387121 (-) 303 WP_009853435.1 hypothetical protein -
  GALLO_RS02070 (GALLO_0359) - 387118..387537 (-) 420 WP_009853436.1 HIT family protein -
  GALLO_RS02075 (GALLO_0360) pptA 387601..388326 (+) 726 WP_009853437.1 ABC transporter ATP-binding protein Regulator
  GALLO_RS02080 (GALLO_0361) pptB 388328..389362 (+) 1035 WP_009853438.1 ABC transporter permease Regulator
  GALLO_RS02085 (GALLO_0362) ccrZ 389427..390221 (+) 795 WP_012961430.1 cell cycle regulator CcrZ -
  GALLO_RS02090 (GALLO_0363) trmB 390221..390859 (+) 639 WP_003063401.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  GALLO_RS02100 (GALLO_0364) - 391202..392227 (+) 1026 WP_012961431.1 GGDEF domain-containing protein -
  GALLO_RS02105 (GALLO_0365) - 392233..393300 (+) 1068 WP_009853440.1 bifunctional glycosyltransferase family 2/GtrA family protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 39738.84 Da        Isoelectric Point: 10.5816

>NTDB_id=32159 GALLO_RS02080 WP_009853438.1 388328..389362(+) (pptB) [Streptococcus gallolyticus UCN34]
MKEVFQKRRSAFLGQCLKYLRYVFNDHFVLVLVFLTGFLMVQYSQLLRQFPSQTVVIDVILVLVILVLLSLGKIATYLEA
PDKLFYLPKEIEILQWLSQARRRAFVIWTIVQTVILVLLAPIFFKLGFSTVTFGILLLALAVVKWLVMKEKSKVFFSQGK
FSWDAAISYEAKRRQGVLKFFSLFTTVKGISASVKRRSYLDGLLGLVKKTHAKTWSNLYLRAFLRSSDYFALTLRLLALS
LLALIFISNRLVAVGLALVFNYLLLFQLLTLSQHFDYQYLTNLYPISEKQKAANLKTFLKKLSYLLGFLELLLTFSWQAA
GLLVLVTVIITEWYLPYKINKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=32159 GALLO_RS02080 WP_009853438.1 388328..389362(+) (pptB) [Streptococcus gallolyticus UCN34]
ATGAAAGAAGTTTTTCAAAAGCGCCGTAGTGCTTTTTTAGGGCAATGCTTAAAGTATCTTCGTTATGTCTTTAATGACCA
TTTTGTGCTAGTCTTGGTTTTCTTAACAGGTTTTCTGATGGTTCAATACAGCCAGCTGTTACGTCAGTTTCCAAGTCAGA
CAGTCGTTATTGACGTGATTTTGGTCTTGGTTATCCTTGTTTTGCTTAGCCTTGGGAAGATTGCGACTTATTTGGAAGCA
CCTGATAAATTGTTCTATTTGCCAAAAGAAATTGAGATTTTGCAATGGCTATCACAGGCAAGACGTCGTGCTTTTGTGAT
TTGGACGATCGTGCAAACGGTAATTCTTGTCTTATTAGCTCCTATCTTCTTTAAACTAGGTTTTTCAACGGTTACCTTTG
GCATTTTATTGCTTGCTTTAGCGGTTGTGAAATGGCTTGTAATGAAAGAAAAAAGCAAGGTATTCTTTTCTCAAGGAAAA
TTTTCATGGGATGCTGCCATTTCTTATGAAGCAAAACGTCGTCAAGGAGTGCTTAAATTCTTTTCACTTTTCACAACGGT
TAAGGGAATTTCAGCTAGTGTGAAACGTCGTTCGTACTTGGATGGTTTGCTTGGTTTGGTCAAAAAAACACATGCCAAAA
CATGGTCAAATTTGTACCTACGTGCGTTTTTACGGAGTTCAGATTATTTTGCTTTAACCTTGCGATTACTCGCATTGAGC
TTGCTTGCGCTTATCTTTATTTCCAATCGCTTGGTAGCAGTTGGCTTGGCTTTGGTCTTTAATTATTTATTACTTTTTCA
ATTATTAACCCTATCCCAACATTTTGATTATCAATATTTGACCAATCTTTATCCAATTTCTGAAAAGCAAAAGGCGGCTA
ATTTAAAGACATTTTTGAAAAAATTATCGTATTTACTGGGCTTTTTGGAGTTGTTATTAACGTTTTCTTGGCAAGCAGCG
GGCTTGTTGGTTTTGGTAACGGTTATTATTACAGAATGGTATCTTCCTTACAAAATCAATAAGATGATTGACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A060RH76

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

46.221

100

0.462

  pptB Streptococcus salivarius strain HSISS4

46.221

100

0.462


Multiple sequence alignment