Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | EAV54_RS10635 | Genome accession | NZ_CP033110 |
| Coordinates | 2200851..2201231 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836915.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii ATCC 17978 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2195851..2206231
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EAV54_RS10605 (EAV54_10630) | tadA | 2195970..2196473 (-) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
| EAV54_RS10610 (EAV54_10635) | - | 2196480..2197604 (-) | 1125 | WP_000982062.1 | enoyl-CoA hydratase/isomerase family protein | - |
| EAV54_RS10615 (EAV54_10640) | ung | 2197601..2198314 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| EAV54_RS10620 (EAV54_10645) | - | 2198365..2198961 (-) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| EAV54_RS10625 (EAV54_10650) | gspK | 2199191..2200150 (-) | 960 | WP_000301478.1 | type II secretion system minor pseudopilin GspK | - |
| EAV54_RS10630 (EAV54_10655) | xcpW | 2200150..2200851 (-) | 702 | WP_000594584.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| EAV54_RS10635 (EAV54_10660) | xcpV | 2200851..2201231 (-) | 381 | WP_000836915.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| EAV54_RS10640 (EAV54_10665) | - | 2201221..2201775 (-) | 555 | WP_000841375.1 | type II secretion system protein | - |
| EAV54_RS10645 (EAV54_10670) | - | 2201785..2202393 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| EAV54_RS10650 (EAV54_10675) | - | 2202431..2203204 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| EAV54_RS10655 (EAV54_10680) | - | 2203222..2203563 (-) | 342 | WP_001183025.1 | PilZ domain-containing protein | - |
| EAV54_RS10660 (EAV54_10685) | - | 2203575..2204555 (-) | 981 | WP_001075412.1 | DNA polymerase III subunit delta' | - |
| EAV54_RS10665 (EAV54_10690) | kdsB | 2204567..2205328 (-) | 762 | WP_000680696.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13957.17 Da Isoelectric Point: 9.8004
>NTDB_id=321498 EAV54_RS10635 WP_000836915.1 2200851..2201231(-) (xcpV) [Acinetobacter baumannii ATCC 17978]
MKSKGFTLLEVMVALAIFAVAAVALTKVATQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGEIWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVATQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGEIWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=321498 EAV54_RS10635 WP_000836915.1 2200851..2201231(-) (xcpV) [Acinetobacter baumannii ATCC 17978]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAACGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAGGTAACTTCCCAAGGTGAAATTTGGCAAATT
GATAAGTCAGCTCAATCTACAATTAGCCCAAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTTTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAACGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAGGTAACTTCCCAAGGTGAAATTTGGCAAATT
GATAAGTCAGCTCAATCTACAATTAGCCCAAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTTTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
98.413 |
100 |
0.984 |