Detailed information NTG0321497

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: EAV54_RS10630
• Genome accession: NZ_CP033110
• Coordinates: 2200150..2200851 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594584.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii ATCC 17978
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2195150..2205851

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EAV54_RS10600 (EAV54_10625)	-	2195457..2195900 (-)	444	WP_001246675.1	SRPBCC family protein	-
EAV54_RS10605 (EAV54_10630)	tadA	2195970..2196473 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
EAV54_RS10610 (EAV54_10635)	-	2196480..2197604 (-)	1125	WP_000982062.1	enoyl-CoA hydratase/isomerase family protein	-
EAV54_RS10615 (EAV54_10640)	ung	2197601..2198314 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
EAV54_RS10620 (EAV54_10645)	-	2198365..2198961 (-)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
EAV54_RS10625 (EAV54_10650)	gspK	2199191..2200150 (-)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
EAV54_RS10630 (EAV54_10655)	xcpW	2200150..2200851 (-)	702	WP_000594584.1	type II secretion system minor pseudopilin GspJ	Machinery gene
EAV54_RS10635 (EAV54_10660)	xcpV	2200851..2201231 (-)	381	WP_000836915.1	type II secretion system minor pseudopilin GspI	Machinery gene
EAV54_RS10640 (EAV54_10665)	-	2201221..2201775 (-)	555	WP_000841375.1	type II secretion system protein	-
EAV54_RS10645 (EAV54_10670)	-	2201785..2202393 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
EAV54_RS10650 (EAV54_10675)	-	2202431..2203204 (-)	774	WP_000497298.1	TatD family hydrolase	-
EAV54_RS10655 (EAV54_10680)	-	2203222..2203563 (-)	342	WP_001183025.1	PilZ domain-containing protein	-
EAV54_RS10660 (EAV54_10685)	-	2203575..2204555 (-)	981	WP_001075412.1	DNA polymerase III subunit delta'	-
EAV54_RS10665 (EAV54_10690)	kdsB	2204567..2205328 (-)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26622.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=321497 EAV54_RS10630 WP_000594584.1 2200150..2200851(-) (xcpW) [Acinetobacter baumannii ATCC 17978]
MIKNKYIHIRSIASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLNQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=321497 EAV54_RS10630 WP_000594584.1 2200150..2200851(-) (xcpW) [Acinetobacter baumannii ATCC 17978]
ATGATAAAAAATAAATATATTCATATCCGAAGCATTGCTTCTCGTCTTGCGGCGCGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAGTTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAATCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996