Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   EAW52_RS06885 Genome accession   NZ_CP033105
Coordinates   1502781..1503188 (+) Length   135 a.a.
NCBI ID   WP_010795389.1    Uniprot ID   -
Organism   Pseudomonas sp. LTJR-52     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1497781..1508188
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EAW52_RS06855 (EAW52_06855) - 1497978..1498976 (-) 999 WP_122041886.1 aspartate carbamoyltransferase catalytic subunit -
  EAW52_RS06860 (EAW52_06860) pyrR 1498995..1499507 (-) 513 WP_010795394.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  EAW52_RS06865 (EAW52_06865) ruvX 1499504..1499965 (-) 462 WP_019364349.1 Holliday junction resolvase RuvX -
  EAW52_RS06870 (EAW52_06870) - 1499966..1500535 (-) 570 WP_010795392.1 YqgE/AlgH family protein -
  EAW52_RS06875 (EAW52_06875) - 1500587..1501480 (-) 894 WP_122041887.1 energy transducer TonB -
  EAW52_RS06880 (EAW52_06880) gshB 1501589..1502551 (-) 963 WP_122041888.1 glutathione synthase -
  EAW52_RS06885 (EAW52_06885) pilG 1502781..1503188 (+) 408 WP_010795389.1 twitching motility response regulator PilG Regulator
  EAW52_RS06890 (EAW52_06890) pilH 1503228..1503593 (+) 366 WP_010795388.1 twitching motility response regulator PilH -
  EAW52_RS06895 (EAW52_06895) - 1503618..1504154 (+) 537 WP_010795387.1 chemotaxis protein CheW -
  EAW52_RS06900 (EAW52_06900) - 1504338..1506368 (+) 2031 WP_010795386.1 methyl-accepting chemotaxis protein -
  EAW52_RS06905 (EAW52_06905) - 1506399..1507283 (+) 885 WP_010795385.1 protein-glutamate O-methyltransferase CheR -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14960.31 Da        Isoelectric Point: 7.2431

>NTDB_id=321400 EAW52_RS06885 WP_010795389.1 1502781..1503188(+) (pilG) [Pseudomonas sp. LTJR-52]
MEQYSEGLKVMVIDDSKTIRRTAETLLKKVGCEVITAVDGFDALAKIADNHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSRDGLFDKAKGRIVGSDQYLTKPFSKEELIGAIKNHVPNFTPVEHTS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=321400 EAW52_RS06885 WP_010795389.1 1502781..1503188(+) (pilG) [Pseudomonas sp. LTJR-52]
ATGGAACAGTACTCCGAAGGTCTGAAGGTAATGGTAATCGATGATTCGAAAACGATTCGTCGAACCGCCGAGACGCTTCT
CAAGAAAGTAGGCTGCGAAGTTATTACTGCCGTCGATGGATTCGATGCGCTCGCAAAAATTGCGGATAACCATCCCAACA
TCATTTTCGTTGATATCATGATGCCTCGTTTGGACGGTTATCAGACCTGTGCGCTTATCAAGAACAATAGCGCATTCAAA
TCGACGCCGGTCATCATGCTTTCTTCGCGTGACGGCCTCTTTGACAAGGCTAAGGGTCGGATCGTTGGGTCCGATCAATA
CCTGACCAAACCGTTCAGCAAAGAAGAGCTGATCGGCGCAATAAAAAACCATGTGCCTAATTTTACCCCAGTCGAGCATA
CGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

39.516

91.852

0.363

Multiple sequence alignment