Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   D8767_RS02825 Genome accession   NZ_CP033104
Coordinates   614314..614715 (+) Length   133 a.a.
NCBI ID   WP_016712414.1    Uniprot ID   A0AAP7FR54
Organism   Pseudomonas sp. LTGT-11-2Z     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 609314..619715
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D8767_RS02795 (D8767_02795) - 609492..610496 (-) 1005 WP_011536054.1 aspartate carbamoyltransferase catalytic subunit -
  D8767_RS02800 (D8767_02800) pyrR 610509..611027 (-) 519 WP_016712418.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  D8767_RS02805 (D8767_02805) ruvX 611077..611502 (-) 426 WP_012312410.1 Holliday junction resolvase RuvX -
  D8767_RS02810 (D8767_02810) - 611502..612071 (-) 570 WP_016712417.1 YqgE/AlgH family protein -
  D8767_RS02815 (D8767_02815) - 612210..613115 (-) 906 WP_016712416.1 energy transducer TonB -
  D8767_RS02820 (D8767_02820) gshB 613207..614160 (-) 954 WP_016712415.1 glutathione synthase -
  D8767_RS02825 (D8767_02825) pilG 614314..614715 (+) 402 WP_016712414.1 PleD family two-component system response regulator Regulator
  D8767_RS02830 (D8767_02830) pilH 614763..615128 (+) 366 WP_016712413.1 twitching motility response regulator PilH -
  D8767_RS02835 (D8767_02835) - 615125..615679 (+) 555 WP_012274550.1 chemotaxis protein CheW -
  D8767_RS02840 (D8767_02840) - 615727..617766 (+) 2040 WP_223623663.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14564.84 Da        Isoelectric Point: 6.2220

>NTDB_id=321377 D8767_RS02825 WP_016712414.1 614314..614715(+) (pilG) [Pseudomonas sp. LTGT-11-2Z]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHQPGIIFVDVLMPRLDGYQTCAVIKHNSAFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFVATQQPAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=321377 D8767_RS02825 WP_016712414.1 614314..614715(+) (pilG) [Pseudomonas sp. LTGT-11-2Z]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCCCGCACGATCCGCCGCACCGCACAGATGTTGCTCGGTGAAGC
GGGCTGCGAGGTGATCACTGCCAGCGATGGCTTCGATGCCCTGGCCAAGATCGTCGACCACCAGCCCGGTATCATCTTCG
TCGATGTGCTGATGCCGCGCCTGGACGGCTACCAGACCTGCGCCGTGATCAAGCACAACAGTGCTTTCAAGGACACGCCG
GTCATCCTGCTGTCGTCGCGCGACGGCCTGTTCGACAAAGCCCGCGGCCGGGTGGTCGGTTCTGATCAGTTTCTGACCAA
GCCGTTCAGCAAAGAAGAACTGCTCGATGCGATCCGCGCCCACGTGCCCGGTTTTGTCGCAACCCAACAACCCGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70

90.226

0.632

Multiple sequence alignment