Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilA1 | Type | Machinery gene |
| Locus tag | PCC8801_RS12335 | Genome accession | NC_011726 |
| Coordinates | 2615065..2615595 (-) | Length | 176 a.a. |
| NCBI ID | WP_012595797.1 | Uniprot ID | B7K3Z0 |
| Organism | Rippkaea orientalis PCC 8801 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2610065..2620595
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PCC8801_RS12315 (PCC8801_2518) | - | 2610150..2611742 (+) | 1593 | WP_012595793.1 | ArnT family glycosyltransferase | - |
| PCC8801_RS12320 (PCC8801_2519) | - | 2611787..2613370 (+) | 1584 | WP_012595794.1 | type II CAAX endopeptidase family protein | - |
| PCC8801_RS12325 (PCC8801_2520) | - | 2613612..2614421 (+) | 810 | WP_012595795.1 | hypothetical protein | - |
| PCC8801_RS12330 (PCC8801_2521) | - | 2614565..2614840 (+) | 276 | WP_012595796.1 | YggT family protein | - |
| PCC8801_RS12335 (PCC8801_2522) | pilA/pilA1 | 2615065..2615595 (-) | 531 | WP_012595797.1 | type IV pilin-like G/H family protein | Machinery gene |
| PCC8801_RS12340 (PCC8801_2523) | - | 2615745..2616827 (-) | 1083 | WP_012595798.1 | AI-2E family transporter | - |
| PCC8801_RS12345 (PCC8801_2524) | - | 2617026..2618504 (+) | 1479 | WP_012595799.1 | LCP family protein | - |
| PCC8801_RS12350 (PCC8801_2525) | - | 2618501..2619019 (+) | 519 | WP_012595800.1 | pentapeptide repeat-containing protein | - |
| PCC8801_RS12355 (PCC8801_2526) | - | 2619095..2619592 (+) | 498 | WP_012595801.1 | 2TM domain-containing protein | - |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 18101.54 Da Isoelectric Point: 9.8160
>NTDB_id=32116 PCC8801_RS12335 WP_012595797.1 2615065..2615595(-) (pilA/pilA1) [Rippkaea orientalis PCC 8801]
MNAQFKTKLIQHLAAKKGNKGFTLIELLVVVIIIGVLAAIALPNLLSQVGKARESEAKSFVGAVNRAQQGYYTENAAFAG
TLGDVEVPAGTPKYYSFPTTLGTSTGTVVANGTNNNKNGTRDYAGGTQYNTATRAFDTVVCRGDVGSTAATSTPGGAGEV
SAATAMTCATGFKILK
MNAQFKTKLIQHLAAKKGNKGFTLIELLVVVIIIGVLAAIALPNLLSQVGKARESEAKSFVGAVNRAQQGYYTENAAFAG
TLGDVEVPAGTPKYYSFPTTLGTSTGTVVANGTNNNKNGTRDYAGGTQYNTATRAFDTVVCRGDVGSTAATSTPGGAGEV
SAATAMTCATGFKILK
Nucleotide
Download Length: 531 bp
>NTDB_id=32116 PCC8801_RS12335 WP_012595797.1 2615065..2615595(-) (pilA/pilA1) [Rippkaea orientalis PCC 8801]
ATGAACGCTCAATTCAAAACCAAACTCATCCAACACCTCGCTGCTAAAAAAGGAAATAAAGGTTTCACCTTAATTGAATT
ATTGGTTGTTGTTATTATTATCGGTGTACTGGCTGCGATCGCTCTCCCCAACCTCCTCTCTCAAGTGGGTAAAGCCAGAG
AATCTGAAGCTAAGTCCTTCGTCGGTGCAGTTAACCGCGCTCAACAAGGCTACTACACTGAAAATGCTGCTTTTGCTGGC
ACTTTAGGTGATGTTGAAGTTCCTGCTGGTACTCCCAAATACTACAGTTTCCCCACTACTTTAGGTACTAGCACGGGTAC
TGTTGTTGCCAATGGAACTAACAACAACAAAAATGGCACACGGGATTATGCTGGTGGTACTCAATATAACACTGCTACCC
GCGCATTTGATACCGTTGTTTGTCGTGGTGATGTAGGCAGTACCGCAGCAACCAGTACTCCTGGAGGTGCAGGTGAGGTT
AGCGCGGCGACTGCTATGACCTGTGCAACTGGCTTTAAAATTCTTAAATAA
ATGAACGCTCAATTCAAAACCAAACTCATCCAACACCTCGCTGCTAAAAAAGGAAATAAAGGTTTCACCTTAATTGAATT
ATTGGTTGTTGTTATTATTATCGGTGTACTGGCTGCGATCGCTCTCCCCAACCTCCTCTCTCAAGTGGGTAAAGCCAGAG
AATCTGAAGCTAAGTCCTTCGTCGGTGCAGTTAACCGCGCTCAACAAGGCTACTACACTGAAAATGCTGCTTTTGCTGGC
ACTTTAGGTGATGTTGAAGTTCCTGCTGGTACTCCCAAATACTACAGTTTCCCCACTACTTTAGGTACTAGCACGGGTAC
TGTTGTTGCCAATGGAACTAACAACAACAAAAATGGCACACGGGATTATGCTGGTGGTACTCAATATAACACTGCTACCC
GCGCATTTGATACCGTTGTTTGTCGTGGTGATGTAGGCAGTACCGCAGCAACCAGTACTCCTGGAGGTGCAGGTGAGGTT
AGCGCGGCGACTGCTATGACCTGTGCAACTGGCTTTAAAATTCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilA1 | Synechocystis sp. PCC 6803 |
54.491 |
94.886 |
0.517 |