Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   D9777_RS03055 Genome accession   NZ_CP033054
Coordinates   580147..580545 (-) Length   132 a.a.
NCBI ID   WP_014416873.1    Uniprot ID   I2C179
Organism   Bacillus velezensis strain Bac57     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 575147..585545
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9777_RS03030 - 575319..576521 (+) 1203 WP_021494201.1 GTP-binding protein -
  D9777_RS03035 - 576586..577722 (+) 1137 WP_021494202.1 zinc-dependent alcohol dehydrogenase -
  D9777_RS03040 - 577737..578171 (+) 435 WP_021494203.1 RDD family protein -
  D9777_RS03045 - 578243..578566 (+) 324 WP_007409357.1 YckD family protein -
  D9777_RS03050 - 578670..580106 (+) 1437 WP_021494204.1 family 1 glycosylhydrolase -
  D9777_RS03055 nin/comJ 580147..580545 (-) 399 WP_014416873.1 competence protein ComJ Regulator
  D9777_RS03060 nucA/comI 580566..581003 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  D9777_RS03065 hxlB 581334..581891 (-) 558 WP_021494205.1 6-phospho-3-hexuloisomerase -
  D9777_RS03070 hxlA 581888..582523 (-) 636 WP_014416875.1 3-hexulose-6-phosphate synthase -
  D9777_RS03075 - 582755..583117 (+) 363 WP_021494206.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14893.89 Da        Isoelectric Point: 4.7846

>NTDB_id=320907 D9777_RS03055 WP_014416873.1 580147..580545(-) (nin/comJ) [Bacillus velezensis strain Bac57]
MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLSFNIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=320907 D9777_RS03055 WP_014416873.1 580147..580545(-) (nin/comJ) [Bacillus velezensis strain Bac57]
TTGATTAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTCTTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C179

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

76.515

100

0.765

Multiple sequence alignment