Detailed information
Bioinformatically predicted
Overview
| Name | rapF | Type | Regulator |
| Locus tag | D9779_RS19245 | Genome accession | NZ_CP033052 |
| Coordinates | 3712232..3713377 (+) | Length | 381 a.a. |
| NCBI ID | WP_010328972.1 | Uniprot ID | - |
| Organism | Bacillus vallismortis strain Bac111 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3707232..3718377
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9779_RS19210 | - | 3707842..3708270 (-) | 429 | WP_100739912.1 | DUF1934 domain-containing protein | - |
| D9779_RS19215 | - | 3708582..3708710 (+) | 129 | Protein_3686 | subtilosin A family bacteriocin | - |
| D9779_RS19220 | albA | 3708845..3710149 (+) | 1305 | Protein_3687 | subtilosin maturase AlbA | - |
| D9779_RS19225 | albB | 3710204..3710365 (+) | 162 | WP_121643504.1 | antilisterial bacteriocin subtilosin biosynthesis protein AlbB | - |
| D9779_RS20620 | - | 3710362..3710496 (+) | 135 | Protein_3689 | ATP-binding cassette domain-containing protein | - |
| D9779_RS21105 | - | 3710500..3710601 (+) | 102 | Protein_3690 | bacteriocin biosynthesis protein AlbG | - |
| D9779_RS19235 | - | 3710608..3712002 (-) | 1395 | WP_121643788.1 | YncE family protein | - |
| D9779_RS19245 | rapF | 3712232..3713377 (+) | 1146 | WP_010328972.1 | response regulator aspartate phosphatase RapF | Regulator |
| D9779_RS19250 | phrF | 3713361..3713480 (+) | 120 | WP_003222023.1 | phosphatase RapF inhibitor PhrF | Regulator |
| D9779_RS19255 | - | 3713725..3714198 (+) | 474 | WP_010328973.1 | hypothetical protein | - |
| D9779_RS19260 | - | 3714355..3715143 (+) | 789 | WP_010328974.1 | membrane protein | - |
| D9779_RS19275 | - | 3716619..3717266 (+) | 648 | WP_010328977.1 | ABC transporter ATP-binding protein | - |
| D9779_RS19280 | - | 3717259..3717822 (+) | 564 | WP_121643507.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 381 a.a. Molecular weight: 45646.93 Da Isoelectric Point: 5.0649
>NTDB_id=320895 D9779_RS19245 WP_010328972.1 3712232..3713377(+) (rapF) [Bacillus vallismortis strain Bac111]
MTGVISSSSVGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLVEIDKKQARLTGVLDYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFKKAYSMAEAENQPQLMGRTLYNIGLCKNSQSQYED
AVTYFKRAITVFEESNILPSLPQAYFLITQIHYKLGKMDKAHAYHSKGTAYSQEAGDSIYLSEFEFLKSLYLSGPDEEAI
QRFFDFLESKMLYADLEDFALDVAKYYHERENFQKASAYFLKVEQVRQLIQGGVRLYEIEV
MTGVISSSSVGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLVEIDKKQARLTGVLDYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFKKAYSMAEAENQPQLMGRTLYNIGLCKNSQSQYED
AVTYFKRAITVFEESNILPSLPQAYFLITQIHYKLGKMDKAHAYHSKGTAYSQEAGDSIYLSEFEFLKSLYLSGPDEEAI
QRFFDFLESKMLYADLEDFALDVAKYYHERENFQKASAYFLKVEQVRQLIQGGVRLYEIEV
Nucleotide
Download Length: 1146 bp
>NTDB_id=320895 D9779_RS19245 WP_010328972.1 3712232..3713377(+) (rapF) [Bacillus vallismortis strain Bac111]
GTGACAGGTGTCATATCTTCTTCTTCCGTCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAGTATTTACGTAGAGAAATCAAACAAGAGCTGGATCAAATGGAAGAAGATCAAGATCTTCATTTGTACTATT
CACTGATGGAATTCCGGCACAACCTGATGCTTGAGTACCTTGAACCACTAGAAAAAATGCGGATCGAGGAACAGCCGCGG
CTGTCTGATTTGCTGGTTGAGATTGATAAAAAACAGGCTCGTTTAACCGGAGTCCTTGATTATTACTTTAATTTCTTCAG
GGGCATGTACGAACTGGATCAGCGGGAATATCTATCGGCTATTAAATTTTTTAAAAAAGCCGAAAGTAAGTTAATATTCG
TTAAGGATCGGATCGAGAAGGCAGAGTTTTTCTTTAAGATGTCTGAGTCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAGGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTTCAGTGTCATTCTTT
ATTTGCTACCAATTTCTTAGATCTGAAACAATATGAGGACGCCATATCACATTTTAAAAAAGCTTACTCTATGGCGGAAG
CTGAGAATCAGCCCCAATTAATGGGGAGAACATTGTACAACATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAC
GCCGTAACCTATTTCAAAAGAGCAATAACTGTTTTTGAAGAATCTAACATTCTTCCGTCCCTGCCCCAAGCCTATTTTTT
GATTACACAAATACATTATAAATTGGGAAAAATGGATAAAGCTCACGCATATCATAGTAAGGGAACAGCATATTCTCAAG
AGGCCGGAGATTCAATCTATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCTGATGAAGAAGCAATT
CAAAGATTCTTTGATTTCCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTCTTGATGTGGCAAAATATTA
TCATGAACGTGAAAACTTTCAAAAAGCCTCTGCTTATTTCCTAAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGATTGTATGAAATTGAAGTCTAA
GTGACAGGTGTCATATCTTCTTCTTCCGTCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAGTATTTACGTAGAGAAATCAAACAAGAGCTGGATCAAATGGAAGAAGATCAAGATCTTCATTTGTACTATT
CACTGATGGAATTCCGGCACAACCTGATGCTTGAGTACCTTGAACCACTAGAAAAAATGCGGATCGAGGAACAGCCGCGG
CTGTCTGATTTGCTGGTTGAGATTGATAAAAAACAGGCTCGTTTAACCGGAGTCCTTGATTATTACTTTAATTTCTTCAG
GGGCATGTACGAACTGGATCAGCGGGAATATCTATCGGCTATTAAATTTTTTAAAAAAGCCGAAAGTAAGTTAATATTCG
TTAAGGATCGGATCGAGAAGGCAGAGTTTTTCTTTAAGATGTCTGAGTCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAGGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTTCAGTGTCATTCTTT
ATTTGCTACCAATTTCTTAGATCTGAAACAATATGAGGACGCCATATCACATTTTAAAAAAGCTTACTCTATGGCGGAAG
CTGAGAATCAGCCCCAATTAATGGGGAGAACATTGTACAACATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAC
GCCGTAACCTATTTCAAAAGAGCAATAACTGTTTTTGAAGAATCTAACATTCTTCCGTCCCTGCCCCAAGCCTATTTTTT
GATTACACAAATACATTATAAATTGGGAAAAATGGATAAAGCTCACGCATATCATAGTAAGGGAACAGCATATTCTCAAG
AGGCCGGAGATTCAATCTATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCTGATGAAGAAGCAATT
CAAAGATTCTTTGATTTCCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTCTTGATGTGGCAAAATATTA
TCATGAACGTGAAAACTTTCAAAAAGCCTCTGCTTATTTCCTAAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGATTGTATGAAATTGAAGTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
95.276 |
100 |
0.953 |
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
57.895 |
99.738 |
0.577 |