Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   D9779_RS12810 Genome accession   NZ_CP033052
Coordinates   2480814..2481617 (-) Length   267 a.a.
NCBI ID   WP_039074432.1    Uniprot ID   A0AAP3CJH9
Organism   Bacillus vallismortis strain Bac111     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 2475814..2486617
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9779_RS12790 - 2476641..2477822 (-) 1182 WP_121642869.1 acetyl-CoA C-acetyltransferase -
  D9779_RS12795 - 2477951..2478682 (-) 732 WP_121642870.1 glycerophosphodiester phosphodiesterase -
  D9779_RS12800 - 2479165..2480283 (+) 1119 WP_121642871.1 NADH-dependent flavin oxidoreductase -
  D9779_RS12810 spo0A 2480814..2481617 (-) 804 WP_039074432.1 sporulation transcription factor Spo0A Regulator
  D9779_RS12815 spoIVB 2481892..2483172 (-) 1281 WP_121642872.1 SpoIVB peptidase -
  D9779_RS12820 recN 2483347..2485077 (-) 1731 WP_121642873.1 DNA repair protein RecN Machinery gene
  D9779_RS12825 argR 2485112..2485561 (-) 450 WP_010328294.1 arginine repressor ArgR -
  D9779_RS12830 - 2485658..2486503 (-) 846 WP_121642874.1 TlyA family RNA methyltransferase -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29675.19 Da        Isoelectric Point: 6.3913

>NTDB_id=320861 D9779_RS12810 WP_039074432.1 2480814..2481617(-) (spo0A) [Bacillus vallismortis strain Bac111]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSAQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=320861 D9779_RS12810 WP_039074432.1 2480814..2481617(-) (spo0A) [Bacillus vallismortis strain Bac111]
GTGGAGAAAATTAAAGTTTGTGTTGCTGACGATAATCGAGAGCTGGTAAGCCTGTTGAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTCATCGGTGTTGCTTATAACGGACAGGAATGCCTGTCGTTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTGGATATTATTATGCCGCATTTGGACGGACTTGCGGTTTTAGAGCGGCTGCGGGAATCAGACCTGAAAAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGGCAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
GAAACCGTTTGATATGGAAAACCTTGTCGGGCATATCCGCCAGGTCAGCGGGAATGCAAGCAGCGTGACGCATCGCGCAC
CGTCATCACAAAGCAGCATTATACGCAGTGCCCAGCCAGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCACATATTAAGGGCTATCTCTATCTGCGCGAAGCCATCTCAATGGTATACAATGACAT
TGAATTGCTCGGCAGCATTACTAAAGTTCTCTATCCGGACATCGCCAAAAAATTCAACACAACCGCAAGCCGTGTAGAAA
GAGCAATCCGCCATGCGATTGAAGTGGCATGGAGCAGAGGGAATATTGATTCGATTTCCTCGCTGTTCGGCTATACTGTC
AGCATGACAAAAGCTAAACCGACAAATTCGGAATTCATTGCGATGGTTGCGGATAAGCTGAGATTAGAGCATAAGGCTTC
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

99.625

100

0.996


Multiple sequence alignment