Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   D9779_RS05570 Genome accession   NZ_CP033052
Coordinates   1107239..1108030 (+) Length   263 a.a.
NCBI ID   WP_121642177.1    Uniprot ID   -
Organism   Bacillus vallismortis strain Bac111     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1102239..1113030
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9779_RS05545 - 1104225..1105106 (+) 882 WP_010330871.1 PhzF family phenazine biosynthesis isomerase -
  D9779_RS05550 - 1105193..1105777 (+) 585 WP_010330870.1 nitroreductase family protein -
  D9779_RS05555 - 1105817..1106008 (-) 192 WP_014113102.1 YfhD family protein -
  D9779_RS05560 - 1106075..1106185 (-) 111 WP_003223230.1 YfhE family protein -
  D9779_RS05565 - 1106239..1107150 (-) 912 WP_121642176.1 TIGR01777 family oxidoreductase -
  D9779_RS05570 recX 1107239..1108030 (+) 792 WP_121642177.1 recombination regulator RecX Regulator
  D9779_RS05575 - 1108038..1108358 (+) 321 WP_010330868.1 YfhH family protein -
  D9779_RS05580 - 1108495..1109688 (+) 1194 WP_121642178.1 MFS transporter -
  D9779_RS05585 - 1109722..1109874 (-) 153 WP_010330867.1 small, acid-soluble spore protein K -
  D9779_RS05590 - 1109999..1110268 (+) 270 WP_010330866.1 YfhJ family protein -
  D9779_RS05595 - 1110412..1110930 (+) 519 WP_121642179.1 SH3 domain-containing protein -
  D9779_RS05600 - 1111016..1111348 (+) 333 WP_026014554.1 SdpI family protein -
  D9779_RS05605 - 1111335..1112195 (+) 861 WP_121642180.1 alpha/beta fold hydrolase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30834.03 Da        Isoelectric Point: 6.6646

>NTDB_id=320838 D9779_RS05570 WP_121642177.1 1107239..1108030(+) (recX) [Bacillus vallismortis strain Bac111]
MPFITKISAQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSAPVIAEVIHKLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKESLSSFSFEDQTRE
AVKHVEKLLKKDKKCSTKELKQRAQMQLQRKGFSFDIISAALEQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=320838 D9779_RS05570 WP_121642177.1 1107239..1108030(+) (recX) [Bacillus vallismortis strain Bac111]
ATGCCATTTATTACAAAAATATCTGCGCAAAAAAAGAATACGGAACGCTTCAATATCTTTCTCGATGATAAATACGCCTT
CAGTGTGGACGCGGACGTGCTCGTAAAATTTGAGCTTAAAAAGGGAAAAGAGCTTGATGACCTTGACATCATTGAGATTC
AATACGGCGATGAAGTAAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTACCGAATGCGGTCAACGAAAGAGGTA
GAGGACCACTTAAAGAAAAAAGAAACCTCAGCGCCTGTCATTGCAGAAGTCATCCATAAGCTCAACGACTACAAGTACTT
AAACGACCAGGAATTTGCCGCGGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAG
AGCTGAGAGCGAAGGGAATCGACGACGATACTATTAAGGAATCGCTGAGTTCCTTTTCCTTTGAGGATCAGACGAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTTAAAAAGGATAAAAAATGTTCCACAAAAGAACTCAAACAGCGCGCCCAGATGCA
GCTTCAGCGCAAGGGTTTCTCATTTGATATAATCAGCGCCGCGCTGGAGCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGTCTTCACGCCGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTTCTGCAGGAAGAGGAGTAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

96.198

100

0.962

Multiple sequence alignment