Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   D9829_RS02740 Genome accession   NZ_CP033044
Coordinates   552262..552456 (-) Length   64 a.a.
NCBI ID   WP_121609595.1    Uniprot ID   -
Organism   Mesobacillus foraminis strain Bac44     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 547262..557456
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9829_RS02715 - 547499..548518 (-) 1020 WP_121609591.1 ABC transporter ATP-binding protein -
  D9829_RS02720 - 548682..549365 (-) 684 WP_257535655.1 DUF2268 domain-containing protein -
  D9829_RS02725 fabF 549549..550790 (-) 1242 WP_121609592.1 beta-ketoacyl-ACP synthase II -
  D9829_RS02730 - 550821..551753 (-) 933 WP_121609593.1 beta-ketoacyl-ACP synthase III -
  D9829_RS02735 - 551955..552224 (+) 270 WP_121609594.1 hypothetical protein -
  D9829_RS02740 comZ 552262..552456 (-) 195 WP_121609595.1 ComZ family protein Regulator
  D9829_RS02745 med 552479..553429 (-) 951 WP_121613750.1 BMP family ABC transporter substrate-binding protein Regulator
  D9829_RS02750 - 553592..554479 (-) 888 WP_121609596.1 hypothetical protein -
  D9829_RS02755 - 554547..555287 (-) 741 WP_121609597.1 hydrolase -
  D9829_RS02760 - 555562..555753 (+) 192 WP_121609598.1 YjzD family protein -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7359.46 Da        Isoelectric Point: 4.2266

>NTDB_id=320657 D9829_RS02740 WP_121609595.1 552262..552456(-) (comZ) [Mesobacillus foraminis strain Bac44]
MQNSDKTMEFMQIAMKYLPEAKQQLDEAGVELKAELIQPFMSLFTKVMEEAYELGRADAQKQGE

Nucleotide


Download         Length: 195 bp        

>NTDB_id=320657 D9829_RS02740 WP_121609595.1 552262..552456(-) (comZ) [Mesobacillus foraminis strain Bac44]
ATGCAAAATTCGGACAAGACCATGGAGTTTATGCAGATAGCGATGAAGTATCTGCCAGAAGCAAAGCAGCAGCTTGATGA
AGCAGGGGTGGAATTAAAAGCTGAACTCATTCAGCCTTTTATGTCCCTCTTTACAAAAGTAATGGAAGAAGCTTATGAAT
TGGGCAGGGCGGACGCCCAAAAACAGGGAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(5-59)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

65

93.75

0.609

Multiple sequence alignment