Detailed information NTG0320495

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: D9M09_RS15325
• Genome accession: NZ_CP033019
• Coordinates: 3380597..3383032 (-)
• Length: 811 a.a.
• NCBI ID: WP_121669793.1
• Uniprot ID: A0A3G2ED73
• Organism: Janthinobacterium agaricidamnosum strain BHSEK
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3375597..3388032

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9M09_RS15295 (D9M09_15295)	-	3375784..3376584 (-)	801	WP_121669790.1	alpha/beta hydrolase	-
D9M09_RS15300 (D9M09_15300)	-	3376643..3377350 (-)	708	WP_121669791.1	HAD family phosphatase	-
D9M09_RS15305 (D9M09_15305)	-	3377372..3378133 (-)	762	WP_034756294.1	TSUP family transporter	-
D9M09_RS15310 (D9M09_15310)	-	3378285..3379208 (+)	924	WP_070291595.1	LysR family transcriptional regulator	-
D9M09_RS15315 (D9M09_15315)	-	3379212..3379733 (-)	522	WP_083287881.1	N-acetyltransferase	-
D9M09_RS15320 (D9M09_15320)	-	3379793..3380557 (-)	765	WP_121669792.1	hypothetical protein	-
D9M09_RS15325 (D9M09_15325)	comA	3380597..3383032 (-)	2436	WP_121669793.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
D9M09_RS29070	-	3383173..3383349 (+)	177	WP_162995709.1	hypothetical protein	-
D9M09_RS29075	-	3383432..3383614 (-)	183	WP_141749921.1	hypothetical protein	-
D9M09_RS29080	-	3383771..3383932 (-)	162	WP_162995710.1	hypothetical protein	-
D9M09_RS15330 (D9M09_15330)	-	3384381..3386366 (+)	1986	WP_121669794.1	helicase-related protein	-
D9M09_RS15335 (D9M09_15335)	-	3386370..3386843 (-)	474	WP_070310881.1	T6SS effector amidase Tae4 family protein	-

Sequence

Protein

• Length: 811 a.a.
• Molecular weight: 87975.43 Da
• Isoelectric Point: 9.8757

>NTDB_id=320495 D9M09_RS15325 WP_121669793.1 3380597..3383032(-) (comA) [Janthinobacterium agaricidamnosum strain BHSEK]
MRILILGFAAGAAWLQTQAGLPPHAGALLSVIAGAALLMAWLLCRHARWRSCWRSAIALSAGVGLGFYWAAWLAQSAMTP
QLALADEGQDIVVTGTVASLPYRFEQGVRFNFAVEKALNAKVPPLIALSWYAGFRDEVTNEVGDVQPGERWRLTVRLQRP
HGNANPMGFDYEAWLLEQGVRATGYVRPQPRADTPNVRVAAFVPAFGNVVEASRAALRARILRSLEDKQYAGVIVALVVG
DQRAIPQSDWQVFNRTGVSHLISISGLHITMIAGLFALGAGALWRRSFFTDRQLPLLLPAQKVAALAGALAALVYVLLAG
FGVPAQRTLYMLLVVALALWLGRITSIIHILCLALGVVVLLDPWAVLWPGFWLSFGAVATMLYATAGRTTAPLPENASRW
RRLRAAVALGAHTQYVVTVGLVPLTMLLFSQVSLVSPVANALAIPVISLVVTPLSLAGSLLPAPLCDWLLLLAHAIVQML
AQVLDWLGARRFAVWTAPAPPWWSFCWALFGTAWLLAPRGWPQRWAGMLGWLPLLTALPSSPQPGQMWITAFDVGQGMAV
LVETHDHRLLYDTGPAYSLDSDGASRVIVPYLRARGISKLDGVIISHSDLDHAGGAISLLENVQVGWLASSLFDGHPAVE
ARRQARRPYLHCVAGQNWIWEGVRFAMLHPLPASHTDISLKPNARSCTVKITAGKHAILLAGDIEAAQEAQLLARSADGD
LAADVLLAPHHGSGTSSTPAFLNAVHPALAIFQVGHRNRYKHPKPQVYARYGDMGIARLRTDVTGAVVLEFGDDIDATLY
RASRPRYWHGR

Nucleotide

• Length: 2436 bp

>NTDB_id=320495 D9M09_RS15325 WP_121669793.1 3380597..3383032(-) (comA) [Janthinobacterium agaricidamnosum strain BHSEK]
ATGCGCATCCTGATACTCGGCTTTGCCGCTGGCGCCGCCTGGTTGCAGACGCAGGCAGGCTTGCCGCCGCACGCGGGCGC
GCTGCTGTCGGTGATCGCTGGCGCGGCGCTGCTGATGGCGTGGCTGTTGTGCCGACACGCGCGCTGGCGTTCCTGTTGGC
GTTCCGCTATTGCGCTCTCGGCCGGCGTGGGGCTGGGCTTTTATTGGGCCGCCTGGCTGGCCCAGTCCGCCATGACGCCG
CAGCTGGCGCTGGCCGACGAGGGACAGGACATCGTCGTGACGGGCACGGTGGCCAGCTTGCCGTACCGCTTCGAGCAGGG
CGTGCGCTTCAATTTTGCCGTGGAGAAGGCACTCAATGCAAAGGTGCCGCCCTTGATCGCCCTGTCCTGGTATGCGGGCT
TTCGCGATGAGGTGACGAACGAGGTGGGCGACGTGCAGCCGGGTGAACGCTGGCGCCTGACGGTGCGCCTGCAGCGCCCG
CACGGCAACGCGAATCCCATGGGTTTCGATTACGAGGCATGGCTGCTGGAGCAGGGCGTACGCGCCACCGGCTATGTGCG
GCCGCAGCCGCGCGCCGATACGCCGAACGTGCGCGTGGCCGCCTTCGTGCCCGCTTTCGGCAATGTGGTGGAAGCGAGCC
GCGCGGCATTGCGTGCGCGCATACTGCGCAGCCTGGAAGATAAACAGTATGCGGGCGTGATCGTGGCGCTGGTGGTGGGC
GACCAGCGCGCCATTCCCCAGTCGGACTGGCAAGTGTTCAACCGCACGGGTGTCAGTCATTTGATTTCGATTTCCGGCTT
GCATATTACGATGATCGCGGGCTTGTTCGCCCTGGGCGCGGGCGCGCTGTGGCGGCGCTCATTCTTTACCGACCGGCAAC
TGCCCTTGCTGTTGCCGGCGCAAAAGGTGGCGGCGCTGGCCGGTGCGCTGGCGGCATTGGTGTACGTGCTGCTGGCCGGC
TTCGGCGTGCCCGCGCAGCGCACTTTATATATGTTGCTGGTGGTGGCGCTGGCCCTGTGGCTGGGGCGCATCACCAGCAT
CATCCATATCCTGTGCCTGGCGCTGGGCGTGGTCGTGCTGCTTGATCCGTGGGCCGTGCTGTGGCCCGGTTTCTGGCTGT
CGTTCGGCGCCGTCGCCACCATGCTGTACGCGACGGCGGGCCGCACCACGGCGCCGTTGCCGGAGAACGCCAGCCGCTGG
CGCCGCCTGCGTGCGGCCGTGGCGCTCGGTGCGCATACGCAATACGTGGTGACGGTGGGGCTGGTGCCGTTGACGATGCT
GCTGTTTTCGCAAGTCTCGCTCGTGTCGCCCGTCGCCAATGCGCTGGCCATACCCGTCATCAGCCTGGTCGTCACGCCTT
TGTCCCTGGCGGGCAGCCTGCTGCCGGCGCCCCTGTGCGACTGGTTGCTGCTGCTGGCGCACGCCATCGTGCAGATGCTG
GCGCAGGTGCTGGACTGGCTCGGTGCGCGCCGCTTTGCCGTCTGGACGGCGCCCGCGCCGCCATGGTGGAGTTTTTGCTG
GGCATTGTTCGGCACGGCCTGGCTGCTGGCGCCACGCGGATGGCCGCAGCGCTGGGCCGGCATGCTGGGCTGGCTGCCGC
TGCTGACGGCCTTGCCGTCCAGCCCGCAGCCGGGCCAGATGTGGATCACGGCCTTTGATGTGGGACAAGGCATGGCCGTG
CTGGTGGAAACCCACGATCACCGACTGCTGTACGACACGGGCCCCGCCTACAGTCTCGATTCCGACGGCGCCAGCCGTGT
CATCGTGCCGTATCTGCGCGCACGGGGTATCAGCAAGCTCGACGGCGTGATCATCTCGCACAGCGACCTCGATCACGCGG
GCGGCGCTATCTCTCTGCTGGAGAACGTGCAAGTGGGCTGGCTGGCTTCGTCCCTGTTCGATGGCCACCCGGCCGTCGAG
GCCCGGCGGCAAGCCCGGCGTCCGTATCTGCATTGCGTGGCGGGCCAGAACTGGATCTGGGAAGGCGTGCGCTTCGCCAT
GCTGCACCCATTACCCGCCAGCCACACGGACATTTCACTGAAACCGAACGCCCGCAGCTGCACCGTGAAGATCACGGCCG
GCAAGCATGCAATCTTGCTGGCCGGCGACATCGAGGCGGCGCAGGAAGCACAGTTGCTGGCGCGCTCGGCCGATGGCGAC
CTGGCCGCCGACGTGCTGCTGGCGCCGCACCACGGCAGCGGCACCTCGTCGACACCGGCCTTTCTGAACGCCGTCCATCC
GGCCCTGGCGATTTTCCAGGTCGGGCACCGGAACCGCTACAAACATCCGAAGCCGCAAGTGTATGCGCGCTATGGCGACA
TGGGCATTGCCCGGCTGCGCACGGATGTGACGGGGGCGGTGGTGCTGGAATTTGGCGACGATATCGATGCGACGTTGTAC
CGGGCCAGTCGGCCACGGTACTGGCATGGGCGATAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (237-519)

• Metallo-beta-lactamase superfamily (Lactamase_B) (554-709)

• Domain of unknown function (DUF4131) (DUF4131) (29-188)

3D structure

• AlphaFold DB: A0A3G2ED73

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Ralstonia pseudosolanacearum GMI1000	47.262	100	0.49