Detailed information NTG0319956

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: FDQ49_RS07100
• Genome accession: NZ_CP040105
• Coordinates: 1519977..1521290 (-)
• Length: 437 a.a.
• NCBI ID: WP_002053318.1
• Uniprot ID: A0A1V2UY05
• Organism: Acinetobacter nosocomialis M2
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1514977..1526290

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FDQ49_RS07085 (FDQ49_07085)	-	1516867..1518393 (+)	1527	WP_022575787.1	fumarate hydratase	-
FDQ49_RS07090 (FDQ49_07090)	-	1518534..1519088 (+)	555	WP_002053362.1	DUF2059 domain-containing protein	-
FDQ49_RS07095 (FDQ49_07095)	-	1519113..1519829 (-)	717	WP_002053277.1	DUF2846 domain-containing protein	-
FDQ49_RS07100 (FDQ49_07100)	clpX	1519977..1521290 (-)	1314	WP_002053318.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
FDQ49_RS07105 (FDQ49_07105)	clpP	1521392..1521997 (-)	606	WP_000289452.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	-
FDQ49_RS07110 (FDQ49_07110)	tig	1522192..1523526 (-)	1335	WP_002053278.1	trigger factor	-
FDQ49_RS07115 (FDQ49_07115)	-	1523942..1526233 (+)	2292	WP_004883343.1	TonB-dependent receptor	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 48094.93 Da
• Isoelectric Point: 5.0785

>NTDB_id=319956 FDQ49_RS07100 WP_002053318.1 1519977..1521290(-) (clpX) [Acinetobacter nosocomialis M2]
MSEHPQGQKHCSFCGKTQSEVGKLIAGEDAYICNECVDVCLDLVQTSQQVEAGDWASKALPKPHEIRAALDQYVIGQDLA
KKTLSVAVYNHYKRLKVGQSGHVSKDVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENI
VQKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGGRKHPQQEFIQIDTS
NILFICGGAFAGLEKIVQQRQEKGGIGFTADVKKKDESKKIAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEAL
MQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDLPSRTDVGTVFINEAV
INGEAEPVYKPERQPKETATHESVAKADLKVIDSKSA

Nucleotide

• Length: 1314 bp

>NTDB_id=319956 FDQ49_RS07100 WP_002053318.1 1519977..1521290(-) (clpX) [Acinetobacter nosocomialis M2]
ATGTCCGAACATCCTCAAGGACAAAAACATTGTTCATTTTGCGGTAAAACGCAGTCTGAAGTCGGGAAACTGATTGCGGG
TGAGGACGCATATATTTGTAATGAGTGTGTAGATGTCTGCTTAGACCTTGTACAAACCAGCCAACAGGTTGAAGCAGGTG
ACTGGGCGAGCAAGGCATTGCCAAAACCACATGAAATACGTGCTGCGCTTGATCAATATGTGATTGGTCAGGATCTTGCC
AAAAAGACATTATCTGTTGCCGTTTATAACCATTATAAGCGTTTGAAAGTCGGGCAATCTGGTCATGTGTCTAAAGATGT
GGAAATTGCTAAAAGTAACATTCTACTGATTGGACCTACCGGTTCAGGTAAAACATTACTTGCTCAAACATTAGCTCGTT
TGTTAGATGTTCCATTTGCGATGGCAGATGCGACCACTTTAACTGAAGCGGGTTATGTCGGCGAAGACGTTGAAAATATT
GTACAAAAGCTTTTGCAAAAAGCAGATTACGATGTAGAAAAAGCTCAAAAGGGCATTATCTATATCGATGAAATCGACAA
GATTACACGTAAATCTGAAAATCCTTCGATTACGCGTGACGTTTCTGGTGAAGGTGTACAACAAGCATTGCTTAAGATGA
TTGAAGGTACTGTAGCTTCAATTCCACCACAAGGTGGACGTAAACATCCTCAGCAAGAGTTCATTCAAATTGATACCTCA
AATATTTTATTTATTTGTGGTGGTGCATTTGCTGGACTGGAAAAAATTGTACAACAGCGTCAAGAGAAAGGCGGAATTGG
CTTTACAGCTGACGTGAAGAAAAAAGATGAAAGCAAGAAAATTGCTGAATTGTTCCGTCAAGTTGAGCCAACTGACTTAG
TAAAATTTGGTTTAATTCCAGAGTTTATTGGCCGTTTACCAGTCATTGCGACGCTAGAAGAGCTTGATGAAGAAGCATTA
ATGCAAATTTTGACAGAACCGAAAAATGCATTAACTCGTCAATACCAATACTTGTTCAATATGGAAAATGTTGACCTTGT
ATTTGAAGACTCTGCTTTACGTGCAGTTGCTAAGCGAGCGCTTGAGCGTAATACCGGAGCTCGTGGTCTACGTTCGATTC
TGGAAAACGTTTTACTTGAAACAATGTATGACTTACCAAGTCGTACAGATGTAGGAACAGTTTTCATTAATGAAGCAGTG
ATTAATGGTGAAGCTGAACCTGTTTATAAGCCAGAACGCCAGCCTAAAGAAACAGCAACTCATGAAAGTGTTGCTAAGGC
AGATTTAAAAGTAATTGATTCGAAGTCTGCTTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (111-309)

• ClpX C4-type zinc finger (zf-C4_ClpX) (9-45)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (315-390)

3D structure

• AlphaFold DB: A0A1V2UY05

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	60.15	91.304	0.549
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.683	92.449	0.524