Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   D9C08_RS11705 Genome accession   NZ_CP032872
Coordinates   2216840..2217415 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain 2KL1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2211840..2222415
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C08_RS11675 (D9C08_11675) dapD 2212028..2212738 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  D9C08_RS11680 (D9C08_11680) dapI 2212808..2213932 (+) 1125 WP_014476668.1 N-acetyldiaminopimelate deacetylase -
  D9C08_RS11685 (D9C08_11685) ykuS 2213994..2214239 (+) 246 WP_003232382.1 YkuS family protein -
  D9C08_RS11690 (D9C08_11690) mscT 2214276..2215079 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  D9C08_RS11695 (D9C08_11695) ahpA 2215316..2215858 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  D9C08_RS11700 (D9C08_11700) ykuV 2215928..2216374 (+) 447 WP_014479665.1 thiol-disulfide oxidoreductase YkuV -
  D9C08_RS11705 (D9C08_11705) rok 2216840..2217415 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  D9C08_RS11715 (D9C08_11715) cse15 2218746..2219711 (-) 966 WP_014479669.1 spore protein Cse15 -
  D9C08_RS11720 (D9C08_11720) mobA 2219848..2220447 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  D9C08_RS11725 (D9C08_11725) moeB 2220498..2221517 (+) 1020 WP_014479671.1 molybdopterin-synthase adenylyltransferase MoeB -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=319925 D9C08_RS11705 WP_003232378.1 2216840..2217415(+) (rok) [Bacillus subtilis subsp. subtilis strain 2KL1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=319925 D9C08_RS11705 WP_003232378.1 2216840..2217415(+) (rok) [Bacillus subtilis subsp. subtilis strain 2KL1]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment