Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   D9C08_RS08325 Genome accession   NZ_CP032872
Coordinates   1603638..1604432 (+) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain 2KL1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 1598638..1609432
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C08_RS08295 (D9C08_08295) sxzA 1599477..1600508 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  D9C08_RS08300 (D9C08_08300) yfhB 1600623..1601504 (+) 882 WP_069837383.1 PhzF family phenazine biosynthesis isomerase -
  D9C08_RS08305 (D9C08_08305) yfhC 1601592..1602176 (+) 585 WP_032723010.1 nitroreductase -
  D9C08_RS08310 (D9C08_08310) yfhD 1602215..1602406 (-) 192 WP_003233561.1 YfhD family protein -
  D9C08_RS08315 (D9C08_08315) yfhE 1602473..1602583 (-) 111 WP_003223230.1 YfhE family protein -
  D9C08_RS08320 (D9C08_08320) yfhF 1602638..1603549 (-) 912 WP_041332787.1 TIGR01777 family oxidoreductase -
  D9C08_RS08325 (D9C08_08325) recX 1603638..1604432 (+) 795 WP_014479217.1 recombination regulator RecX Regulator
  D9C08_RS08330 (D9C08_08330) yfhH 1604434..1604748 (+) 315 WP_003244592.1 YfhH family protein -
  D9C08_RS08335 (D9C08_08335) yfhI 1604891..1606084 (+) 1194 WP_003243500.1 MFS transporter -
  D9C08_RS08340 (D9C08_08340) - 1606210..1607562 (+) 1353 WP_014478984.1 IS1182 family transposase -
  D9C08_RS08345 (D9C08_08345) sspK 1607696..1607848 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  D9C08_RS08350 (D9C08_08350) yfhJ 1607973..1608242 (+) 270 WP_003243789.1 YfhJ family protein -
  D9C08_RS08355 (D9C08_08355) yfhK 1608387..1608905 (+) 519 WP_014479218.1 SH3 domain-containing protein -
  D9C08_RS08360 (D9C08_08360) spdL 1608990..1609322 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=319908 D9C08_RS08325 WP_014479217.1 1603638..1604432(+) (recX) [Bacillus subtilis subsp. subtilis strain 2KL1]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=319908 D9C08_RS08325 WP_014479217.1 1603638..1604432(+) (recX) [Bacillus subtilis subsp. subtilis strain 2KL1]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains


Predicted by InterproScan.

(84-204)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992


Multiple sequence alignment