Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   D9C20_RS12050 Genome accession   NZ_CP032867
Coordinates   2274599..2275549 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis subsp. subtilis strain N4-2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2269599..2280549
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C20_RS12025 (D9C20_12025) rapC 2271054..2272202 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  D9C20_RS12030 (D9C20_12030) phrC 2272186..2272308 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  D9C20_RS12035 (D9C20_12035) yczM 2272407..2272496 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  D9C20_RS12040 (D9C20_12040) yczN 2272578..2272691 (-) 114 WP_014478831.1 YjcZ family sporulation protein -
  D9C20_RS12045 (D9C20_12045) thrD 2272844..2274208 (-) 1365 WP_014478832.1 aspartate kinase -
  D9C20_RS12050 (D9C20_12050) ceuB 2274599..2275549 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  D9C20_RS12055 (D9C20_12055) yclO 2275542..2276489 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  D9C20_RS12060 (D9C20_12060) yclP 2276483..2277241 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  D9C20_RS12065 (D9C20_12065) yclQ 2277263..2278216 (+) 954 WP_014478834.1 petrobactin ABC transporter substrate-binding protein YclQ -
  D9C20_RS12070 (D9C20_12070) - 2278446..2279378 (+) 933 WP_014478835.1 restriction endonuclease -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=319818 D9C20_RS12050 WP_014475804.1 2274599..2275549(+) (ceuB) [Bacillus subtilis subsp. subtilis strain N4-2]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=319818 D9C20_RS12050 WP_014475804.1 2274599..2275549(+) (ceuB) [Bacillus subtilis subsp. subtilis strain N4-2]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGTTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment