Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   D9C20_RS07840 Genome accession   NZ_CP032867
Coordinates   1459126..1459245 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis subsp. subtilis strain N4-2     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 1454126..1464245
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C20_RS07815 (D9C20_07815) albG 1454290..1454991 (+) 702 WP_014481222.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  D9C20_RS07820 (D9C20_07820) ywhL 1454997..1456373 (-) 1377 WP_014481223.1 YncE family protein -
  D9C20_RS07825 (D9C20_07825) ywhK 1456412..1457767 (-) 1356 WP_014481224.1 YncE family protein -
  D9C20_RS23250 (D9C20_07830) - 1457764..1457994 (-) 231 Protein_1534 hypothetical protein -
  D9C20_RS07835 (D9C20_07835) rapF 1457997..1459142 (+) 1146 WP_014481226.1 response regulator aspartate phosphatase RapF Regulator
  D9C20_RS07840 (D9C20_07840) phrF 1459126..1459245 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  D9C20_RS07845 (D9C20_07845) - 1459343..1459770 (+) 428 Protein_1537 YbaK/EbsC family protein -
  D9C20_RS07850 (D9C20_07850) speB 1459835..1460707 (-) 873 WP_003227545.1 agmatinase -
  D9C20_RS07855 (D9C20_07855) speE 1460768..1461598 (-) 831 WP_003227543.1 spermidine synthase -
  D9C20_RS07860 (D9C20_07860) pbpG 1461800..1463875 (+) 2076 WP_014481227.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=319804 D9C20_RS07840 WP_009968329.1 1459126..1459245(+) (phrF) [Bacillus subtilis subsp. subtilis strain N4-2]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=319804 D9C20_RS07840 WP_009968329.1 1459126..1459245(+) (phrF) [Bacillus subtilis subsp. subtilis strain N4-2]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment