Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | D9C20_RS00590 | Genome accession | NZ_CP032867 |
| Coordinates | 102146..103183 (-) | Length | 345 a.a. |
| NCBI ID | WP_031600685.1 | Uniprot ID | - |
| Organism | Bacillus subtilis subsp. subtilis strain N4-2 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 97146..108183
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9C20_RS00540 (D9C20_00540) | tasA | 97244..98029 (-) | 786 | WP_014480250.1 | biofilm matrix protein TasA | - |
| D9C20_RS00545 (D9C20_00545) | sipW | 98093..98665 (-) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| D9C20_RS00550 (D9C20_00550) | tapA | 98649..99410 (-) | 762 | WP_014480251.1 | amyloid fiber anchoring/assembly protein TapA | - |
| D9C20_RS00555 (D9C20_00555) | yqzG | 99682..100008 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| D9C20_RS00560 (D9C20_00560) | spoIITA | 100050..100229 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| D9C20_RS00565 (D9C20_00565) | comGG | 100300..100674 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| D9C20_RS00570 (D9C20_00570) | comGF | 100675..101058 (-) | 384 | WP_014480254.1 | ComG operon protein ComGF | Machinery gene |
| D9C20_RS00575 (D9C20_00575) | comGE | 101084..101431 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| D9C20_RS00580 (D9C20_00580) | comGD | 101415..101846 (-) | 432 | WP_014480256.1 | comG operon protein ComGD | Machinery gene |
| D9C20_RS00585 (D9C20_00585) | comGC | 101836..102132 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| D9C20_RS00590 (D9C20_00590) | comGB | 102146..103183 (-) | 1038 | WP_031600685.1 | comG operon protein ComGB | Machinery gene |
| D9C20_RS00595 (D9C20_00595) | comGA | 103170..104240 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| D9C20_RS00600 (D9C20_00600) | - | 104452..104649 (-) | 198 | WP_014480259.1 | CBS domain-containing protein | - |
| D9C20_RS00605 (D9C20_00605) | corA | 104651..105604 (-) | 954 | WP_014480260.1 | magnesium transporter CorA | - |
| D9C20_RS00610 (D9C20_00610) | yqhB | 105746..107074 (+) | 1329 | WP_014480261.1 | hemolysin family protein | - |
| D9C20_RS00615 (D9C20_00615) | rsbRD | 107127..107963 (-) | 837 | WP_014480262.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39592.99 Da Isoelectric Point: 9.6259
>NTDB_id=319775 D9C20_RS00590 WP_031600685.1 102146..103183(-) (comGB) [Bacillus subtilis subsp. subtilis strain N4-2]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKSVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKSVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=319775 D9C20_RS00590 WP_031600685.1 102146..103183(-) (comGB) [Bacillus subtilis subsp. subtilis strain N4-2]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGTGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGTGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.071 |
93.623 |
0.928 |