Detailed information    

insolico Bioinformatically predicted

Overview


Name   comZ   Type   Regulator
Locus tag   D9C17_RS18630 Genome accession   NZ_CP032863
Coordinates   3473556..3473747 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis subsp. subtilis strain N2-2     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context


Location: 3468556..3478747
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C17_RS18605 (D9C17_18605) yjzC 3470465..3470644 (+) 180 WP_003245356.1 YjzC family protein -
  D9C17_RS18610 (D9C17_18610) yjzD 3470690..3470875 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  D9C17_RS18615 (D9C17_18615) - 3471124..3471858 (+) 735 WP_014479433.1 hypothetical protein -
  D9C17_RS18620 (D9C17_18620) - 3471940..3472497 (+) 558 WP_014479435.1 hypothetical protein -
  D9C17_RS18625 (D9C17_18625) med 3472588..3473541 (+) 954 WP_014479436.1 transcriptional regulator Med Regulator
  D9C17_RS18630 (D9C17_18630) comZ 3473556..3473747 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  D9C17_RS18635 (D9C17_18635) yjzB 3473777..3474004 (-) 228 WP_031600361.1 spore coat protein YjzB -
  D9C17_RS18640 (D9C17_18640) fabH 3474169..3475107 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  D9C17_RS18645 (D9C17_18645) fabF 3475130..3476371 (+) 1242 WP_014479438.1 beta-ketoacyl-ACP synthase II -
  D9C17_RS18650 (D9C17_18650) yjaZ 3476447..3477232 (+) 786 WP_014479439.1 DUF2268 domain-containing protein -
  D9C17_RS18655 (D9C17_18655) appD 3477424..3478410 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=319671 D9C17_RS18630 WP_003224559.1 3473556..3473747(+) (comZ) [Bacillus subtilis subsp. subtilis strain N2-2]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=319671 D9C17_RS18630 WP_003224559.1 3473556..3473747(+) (comZ) [Bacillus subtilis subsp. subtilis strain N2-2]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains


Predicted by InterproScan.

(4-58)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment