Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   D9C17_RS10335 Genome accession   NZ_CP032863
Coordinates   1887506..1887625 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis subsp. subtilis strain N2-2     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 1882506..1892625
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C17_RS10310 (D9C17_10310) albG 1882670..1883371 (+) 702 WP_014481222.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  D9C17_RS10315 (D9C17_10315) ywhL 1883377..1884753 (-) 1377 WP_014481223.1 YncE family protein -
  D9C17_RS10320 (D9C17_10320) ywhK 1884792..1886147 (-) 1356 WP_014481224.1 YncE family protein -
  D9C17_RS23300 (D9C17_10325) - 1886144..1886374 (-) 231 Protein_2022 hypothetical protein -
  D9C17_RS10330 (D9C17_10330) rapF 1886377..1887522 (+) 1146 WP_014481226.1 response regulator aspartate phosphatase RapF Regulator
  D9C17_RS10335 (D9C17_10335) phrF 1887506..1887625 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  D9C17_RS10340 (D9C17_10340) - 1887723..1888150 (+) 428 Protein_2025 YbaK/EbsC family protein -
  D9C17_RS10345 (D9C17_10345) speB 1888215..1889087 (-) 873 WP_003227545.1 agmatinase -
  D9C17_RS10350 (D9C17_10350) speE 1889148..1889978 (-) 831 WP_003227543.1 spermidine synthase -
  D9C17_RS10355 (D9C17_10355) pbpG 1890180..1892255 (+) 2076 WP_014481227.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=319647 D9C17_RS10335 WP_009968329.1 1887506..1887625(+) (phrF) [Bacillus subtilis subsp. subtilis strain N2-2]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=319647 D9C17_RS10335 WP_009968329.1 1887506..1887625(+) (phrF) [Bacillus subtilis subsp. subtilis strain N2-2]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment