Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   D9C16_RS15800 Genome accession   NZ_CP032861
Coordinates   2917524..2917643 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis subsp. subtilis strain N1-1     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 2912524..2922643
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C16_RS15780 (D9C16_15780) pbpG 2912894..2914969 (-) 2076 WP_014481227.1 transglycosylase domain-containing protein -
  D9C16_RS15785 (D9C16_15785) speE 2915171..2916001 (+) 831 WP_003227543.1 spermidine synthase -
  D9C16_RS15790 (D9C16_15790) speB 2916062..2916934 (+) 873 WP_003227545.1 agmatinase -
  D9C16_RS15795 (D9C16_15795) - 2916999..2917426 (-) 428 Protein_3048 YbaK/EbsC family protein -
  D9C16_RS15800 (D9C16_15800) phrF 2917524..2917643 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  D9C16_RS15805 (D9C16_15805) rapF 2917627..2918772 (-) 1146 WP_014481226.1 response regulator aspartate phosphatase RapF Regulator
  D9C16_RS23175 (D9C16_15810) - 2918775..2919005 (+) 231 Protein_3051 hypothetical protein -
  D9C16_RS15815 (D9C16_15815) ywhK 2919002..2920357 (+) 1356 WP_014481224.1 YncE family protein -
  D9C16_RS15820 (D9C16_15820) ywhL 2920396..2921772 (+) 1377 WP_014481223.1 YncE family protein -
  D9C16_RS15825 (D9C16_15825) albG 2921778..2922479 (-) 702 WP_014481222.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=319584 D9C16_RS15800 WP_009968329.1 2917524..2917643(-) (phrF) [Bacillus subtilis subsp. subtilis strain N1-1]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=319584 D9C16_RS15800 WP_009968329.1 2917524..2917643(-) (phrF) [Bacillus subtilis subsp. subtilis strain N1-1]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment