Detailed information NTG0319561

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: D9C16_RS07510
• Genome accession: NZ_CP032861
• Coordinates: 1331812..1332765 (-)
• Length: 317 a.a.
• NCBI ID: WP_014479436.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain N1-1
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1326812..1337765

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C16_RS07480 (D9C16_07480)	appD	1326943..1327929 (-)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-
D9C16_RS07485 (D9C16_07485)	yjaZ	1328121..1328906 (-)	786	WP_014479439.1	DUF2268 domain-containing protein	-
D9C16_RS07490 (D9C16_07490)	fabF	1328982..1330223 (-)	1242	WP_014479438.1	beta-ketoacyl-ACP synthase II	-
D9C16_RS07495 (D9C16_07495)	fabH	1330246..1331184 (-)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
D9C16_RS07500 (D9C16_07500)	yjzB	1331349..1331576 (+)	228	WP_031600361.1	spore coat protein YjzB	-
D9C16_RS07505 (D9C16_07505)	comZ	1331606..1331797 (-)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
D9C16_RS07510 (D9C16_07510)	med	1331812..1332765 (-)	954	WP_014479436.1	transcriptional regulator Med	Regulator
D9C16_RS07515 (D9C16_07515)	-	1332856..1333413 (-)	558	WP_014479435.1	hypothetical protein	-
D9C16_RS07520 (D9C16_07520)	-	1333495..1334229 (-)	735	WP_014479433.1	hypothetical protein	-
D9C16_RS07525 (D9C16_07525)	yjzD	1334478..1334663 (+)	186	WP_003245236.1	DUF2929 domain-containing protein	-
D9C16_RS07530 (D9C16_07530)	yjzC	1334709..1334888 (-)	180	WP_003245356.1	YjzC family protein	-
D9C16_RS07535 (D9C16_07535)	-	1335066..1336216 (+)	1151	WP_087614160.1	IS3 family transposase	-
D9C16_RS07540 (D9C16_07540)	argF	1336264..1337223 (-)	960	WP_014479432.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.88 Da
• Isoelectric Point: 4.6652

>NTDB_id=319561 D9C16_RS07510 WP_014479436.1 1331812..1332765(-) (med) [Bacillus subtilis subsp. subtilis strain N1-1]
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=319561 D9C16_RS07510 WP_014479436.1 1331812..1332765(-) (med) [Bacillus subtilis subsp. subtilis strain N1-1]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTCCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.369	100	0.994