Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   D9C14_RS10330 Genome accession   NZ_CP032860
Coordinates   1986756..1987706 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis subsp. subtilis strain SSJ-1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1981756..1992706
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C14_RS10305 (D9C14_10305) rapC 1983216..1984364 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  D9C14_RS10310 (D9C14_10310) phrC 1984348..1984470 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  D9C14_RS10315 (D9C14_10315) yczM 1984570..1984659 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  D9C14_RS10320 (D9C14_10320) yczN 1984741..1984854 (-) 114 WP_032678937.1 YjcZ family sporulation protein -
  D9C14_RS10325 (D9C14_10325) thrD 1985007..1986371 (-) 1365 WP_029726569.1 aspartate kinase -
  D9C14_RS10330 (D9C14_10330) ceuB 1986756..1987706 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  D9C14_RS10335 (D9C14_10335) yclO 1987699..1988646 (+) 948 WP_015252820.1 petrobactin ABC transporter permease YclO -
  D9C14_RS10340 (D9C14_10340) yclP 1988640..1989398 (+) 759 WP_015252819.1 petrobactin ABC transporter ATP-binding protein YclP -
  D9C14_RS10345 (D9C14_10345) yclQ 1989420..1990373 (+) 954 WP_015252818.1 petrobactin ABC transporter substrate-binding protein YclQ -
  D9C14_RS10350 (D9C14_10350) cdaE 1990420..1991838 (-) 1419 WP_003234482.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=319487 D9C14_RS10330 WP_014475804.1 1986756..1987706(+) (ceuB) [Bacillus subtilis subsp. subtilis strain SSJ-1]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=319487 D9C14_RS10330 WP_014475804.1 1986756..1987706(+) (ceuB) [Bacillus subtilis subsp. subtilis strain SSJ-1]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCAGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment