Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   D9C12_RS07930 Genome accession   NZ_CP032857
Coordinates   1521979..1522170 (+) Length   63 a.a.
NCBI ID   WP_046380930.1    Uniprot ID   A0AA96V089
Organism   Bacillus subtilis subsp. subtilis strain 2RL2-3     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1516979..1527170
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C12_RS07905 (D9C12_07905) yjzC 1518887..1519066 (+) 180 WP_003245356.1 YjzC family protein -
  D9C12_RS07910 (D9C12_07910) yjzD 1519113..1519298 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  D9C12_RS07915 (D9C12_07915) - 1519547..1520281 (+) 735 WP_014479433.1 hypothetical protein -
  D9C12_RS07920 (D9C12_07920) - 1520363..1520920 (+) 558 WP_014479435.1 hypothetical protein -
  D9C12_RS07925 (D9C12_07925) med 1521011..1521964 (+) 954 WP_069837427.1 transcriptional regulator Med Regulator
  D9C12_RS07930 (D9C12_07930) comZ 1521979..1522170 (+) 192 WP_046380930.1 ComG operon transcriptional repressor ComZ Regulator
  D9C12_RS07935 (D9C12_07935) yjzB 1522200..1522439 (-) 240 WP_003232972.1 spore coat protein YjzB -
  D9C12_RS07940 (D9C12_07940) fabH 1522604..1523542 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  D9C12_RS07945 (D9C12_07945) fabF 1523565..1524806 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  D9C12_RS07950 (D9C12_07950) yjaZ 1524882..1525667 (+) 786 WP_003232967.1 DUF2268 domain-containing protein -
  D9C12_RS07955 (D9C12_07955) appD 1525858..1526844 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7282.31 Da        Isoelectric Point: 4.2564

>NTDB_id=319396 D9C12_RS07930 WP_046380930.1 1521979..1522170(+) (comZ) [Bacillus subtilis subsp. subtilis strain 2RL2-3]
MQHEKSLEFLQIAMKYFPEAKEQFEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=319396 D9C12_RS07930 WP_046380930.1 1521979..1522170(+) (comZ) [Bacillus subtilis subsp. subtilis strain 2RL2-3]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATTTCCCTGAAGCGAAAGAACAGTTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

96.825

100

0.968

Multiple sequence alignment